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Query: gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MNKRNRDIDKAIASLDETRKKYFNLLDEIKNDKYYFPVIMNICSYDSVKKLPYDELLEVNRLAEIKLEKELYELILSKLast
1 -6.850[E] COG0685 5,10-methylenetetrahydrofolate reductase  ali follow..  13  170..KIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQLGK-----MAQVTNVKIPSWLSQMY... 237
2 -6.000[E] KOG0564 5,10-methylenetetrahydrofolate reductase  ali follow..  10  230..KCDAGANFVITQLFFEAETFEKFVRDCREIGITQPIIPGIMPIMGYESIKR-----IAKLSQLEIPQHILDDL... 297
3 -5.090[DZ] COG5217 Microtubule-binding protein involved in cell cycle control  ali follow..  10........TELLTWLNGLLNLNYKKIEECGTGAAYCQIMDSIYGDLPMNRVKFNATAEYEFQTNYKILQSCFS..... 74
4 -5.030[S] COG3195 Uncharacterized protein conserved in bacteria  ali follow..  20  78.DSKAEQASAGLDRLSPEEHSRFTGLNTTYTKKFGFPFIIAVKGLTKEDILA-TACAEVERIARLRLRSML....... 161
5 -4.640[S] COG4837 Uncharacterized protein conserved in bacteria  ali follow..  16  48.........RYVDINKVAEKKDQAYADAILSDEYMYPLVV-------------DEVVAEGNPRLKDVYVKIDAM.... 101
6 -4.410[E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component  ali follow..  11  183.....GEKVDLMAEIENIRARGYTIF------EHDMRFVMGLC--ERIAVLNFGRIIAEGPPEAIRNNPQVIEAYLGR 249
7 -4.320[S] COG4090 Uncharacterized protein conserved in archaea  ali follow..  11  93..........SMPGIGSDIEDVKKLVEDALEEG---GELMGLCYMDMFARAGWYELLDFDCVINADIDGYVLR..... 152
8 -4.270[W] KOG4004 Matricellular protein Osteonectin/SPARC/BM-40  ali follow..  13  234...QFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLV...... 302
9 -4.250[DZ] KOG3000 Microtubule-binding protein involved in cell cycle control  ali follow..  15  61........HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDML----SLKKVKFQAKLEHEYIHNFKLLQASFK..... 126
10 -4.250[I] KOG3006 Transthyretin and related proteins  ali follow..  13  78....VSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGRTHAEMLH-IAAMEQMKITELRMAKLFSD..... 160

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 2 1 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35