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Query: gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MCGGCLMNGVRKRLSDMSFRMINVFKDPKPLKFYKGTVVKLENDSSYQRVFDKTKYIEFAGVIIDIKPQELAILYDSDMSDIQGYSKLYTYQDLNYEPKDRISIADLVYFEIFSIDSSIGYFTLVLKEFIWTNLast
1 -6.850IDP91671 VK03_VACCC [Vaccinia virus Copenhagen]  ali follow..  15  51...............................................................................................YVEYRDKLVGKTVKVKVIRVDYTKGYIDVNYKRMCRHQ 88
2 -6.520IDP90187 gene: CPXV043 CDS; CPXV043 protein AAM13490.1 [Cowpox virus (Brighton Red)]  ali follow..  17  51...............................................................................................YFKYRDKLVGKKVKVKVIRVDYTKGYIDVNYKRMC... 85
3 -6.230IDP91480 putative exoenzyme T [Vibrio parahaemolyticus RIMD 2210633] VPA1327 [Vibrio parahaemolyticus RIMD 2210633]  ali follow..  15  83.....SLNRLRSLLDIGLSKAVAKEPLDVLTKTYRGSRLRDAFGSVAEGEFGVDPAYLSTSRDPEIACEFAEEHKRSAFSVIFGVSGFDMALVNGDTVEAEVLYPKATPMRVLLRDVNKGKESRVLEEL.... 216
4 -5.990IDP01305 lipoprotein-related protein VC1064 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20.CQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDVSLADAPATVIAKQNFITNG-----VPLEFNLAYDSRKIKASHRYSVSAR----IEVDGKLRFITDTHYGVITDPEATKHVPMMLIGV.... 140
5 -5.110IDP90294 eukaryotic translation initiation factor 2 alpha subunit, putative [Toxoplasma gondii ME49] TGME49_113230 [Toxoplasma gondii ME49]  ali follow..  10  1......MEARDGTSSQGATGA------VPKADLGDCRFYEERFPDVEDLVMVKVNRIADLGAYVSLLEYNNMEGMILMSELSKRRFR---------SVNKLIRVGRHEVVMVLRVDPKKGYIDLSKRRVS... 110
6 -4.760IDP04210 ZZZ_0017 [Escherichia coli O157:H7 str. EDL933]  ali follow..  1.....MINNVSSLFPTVN-RNITAVYKKSSFSVSPQKITLNPVKISSPFSPSSSSISATTLFRAPNAHSASFHRQSTAESSLH.................................................. 77
7 -4.640IDP01255 gene: yugI; general stress protein 13 BA_5132 [Bacillus anthracis str. Ames]  ali follow..  26  47................................................................................................DIHDFLKVGDTVEVKVLSIDEEHRKMSLSLKAAK... 80
8 -4.630IDP04340 50S ribosomal protein L5 [Bacillus anthracis str. Sterne] BAS0122 [Bacillus anthracis str. Sterne]  ali follow..  1......MNRLKEKFQKITPALVSKFNYKSVMQVPKIEKIVI----NTGVGDAVSNSKTLDNAVEELTQITGQKPVVTRAKKSIAGFRL----REGMPIGAKVTLRGEQMYEFFD-----KLVSVSLPRV.... 111
9 -4.580IDP91602 hypothetical protein CBU_2056 [Coxiella burnetii RSA 493]  ali follow..  12  48.......NNIRVRLAEVKVDLAKQARILEPISFDERVILTEENKTDTAPRNENPRLRVLQRFYAEATPEACLEIFLQERLQAPSNLGLVGRYNENISP---LLDDLERAYQAARNEETKGEELITSQVNFWT. 196
10 -4.540IDP06428 gene: A3L; A3L [Monkeypox virus Zaire-96-I-16] NP_536540 [Monkeypox virus Zaire-96-I-16]  ali follow..  18  17.CSSTCSDNLTTILSEDGTNIIRAILYSQPKKLK................................................................................................... 49

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.