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Query: gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst MDLRLGNNFELVFNNDLSLVDGIDEQKQRFLIFLKTLRGSLSYAPHWGLDYFLLLKLLKINNLHAVKNYFHEISKELNLDLINISTTIQDNKAHISFFFSGDVLNMEFNLLast
1 -6.860sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2  ali   21  30.......................EEEME---VAKKGLV-------EHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLD.............................. 76
2 -6.790sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2  ali   16  1.............SAELASMELNESSREEMETAKKGLL-------EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEK.................. 75
3 -6.580sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2  ali   15  180.......................EEEMEVAKKGLV----------EHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTSR.................. 238
4 -6.570sp|A9Z1Z3|FR1L4_HUMAN Fer-1-like protein 4 OS=Homo sapiens GN=FER1L4 PE=2 SV=1  ali   13  3.DVVLDDENPLTGESDIYVVKGLEHDKQETDVHFNSLTGEGNF--NWRFVFRFDYLPTEREVSVWRRSGPFALEEAEFRQPAVLVLQVWDYDRISANDFLGSL....... 107
5 -6.550sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2  ali   18  166.........................TEEEMETAKKGLL-------EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEK.................. 225
6 -6.450sp|Q9NRY4|GRLF1_HUMAN Glucocorticoid receptor DNA-binding factor 1 OS=Homo sapiens GN=GRLF1 PE=1 SV=2  ali   16  217.............NNSVLLELPIGLHKKRIELSVLSYHSSFSIRKSRLVHYIVFYSAKRKASLAMLRAFLCEVQDIIPIQLVALTDGAVD-------VLDNDL....... 300
7 -6.420sp|Q13017|RHG05_HUMAN Rho GTPase-activating protein 5 OS=Homo sapiens GN=ARHGAP5 PE=1 SV=2  ali   18  213.............NNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQAD-------FFENEAIKE.... 299
8 -5.990sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=MYOF PE=1 SV=1  ali   17  13..............SDIYVIPGNEENKQKTDVHYRSLDGEGNF--NWRFVFPFDYLPAEQLCIVAKKEHFWSIDQTEFRIPPRLIIQIWDNDKFSLDDYLGFL....... 102
9 -5.920sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1  ali follow..  18  384.........................TTEEQLLAVQAIR-------KYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAEHGK.................. 443
10 -5.920sp|Q9BXK5|B2L13_HUMAN Bcl-2-like protein 13 OS=Homo sapiens GN=BCL2L13 PE=1 SV=1  ali follow..  17  106...HLGEKVSQELKEPLKALQMLLSQPVTYQAFRECTLETTVHASGWNLLRQMLLELTRRGQLSALLQFGVTYLEDYSAEYI............................ 194

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.