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Query: gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSDKFTIKFKGILDHAATKKAIEQDISKMEKYLKPKKSSLGSTKDIVKNNLSDKKKELSRQSKFESLRERVEKYRLTQTKKLIKQGMGFEKARKEAFRRSLMSDRDKRRLEYKELAKESKAKSKMLAASQGKGLVAKIAIGSALGNIISNAMSKVGGGLLGFAKKAVEEDTKTKRTQLLNKAFYGDPKEKEGLLKIIGGMKGFERDLEKEEFLNQASVFKGTLRDLDMLNETNLKNAVEFAAMLKSSGAMSSEDAVKAVNSVLGGDGSELFDLLKKSGVGDKYIEDAKMAWQSGAQVDLESRITKMMEMFEDFKSFGLTKKVNNAESIQSNLASAEQTLQNLTTTVLDPLLDLINKITNYFKDFAFETHIINPIINGIKSIFNLNYFFAKLKSMLPGWMGGDEGAALKKLQEEIQNQDNANSTPLast
1 -8.350sp|Q9Y6C2|EMIL1_HUMAN(removed signalp:1-23) EMILIN-1 OS=Homo sapiens GN=EMILIN1 PE=1 SV=2  ali   10  29...............ECCSPELGRRLAELERRLDVVAGSVTVLSGRRGTELGGAAGQGGHPPGYTSLASRLSRLRFNSTLGPSEEQEESWPGAPGGLSHWLPAARGRLEQLGGLLANVSGELGGRLDLLEEQVAGAMQACGQLCSGAPGEQDSQVSEILSALERRVLDSEGQLRLVGSGLHTVEAAGEARQATLEGLQE--------VVGRLQDRVDAQDETAAEFTLRLNLTAARLGQLEGLLQAHGDGGVQEELGRLRDGVERCSCPLLP........................................................................................................................................................ 285
2 -7.530sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1  ali   1...........LSPSKEKSSDDTTDAQMDEQDLNEPLAKVSL----LKDDLQGAQSEIEAKQEIQHLRKELIEAQCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLHIDTENLREEKDSEITSTRDELLSARDEILLLHQAA-AKVASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLQGELEKLRKEWNALETECHSLKRENVLLSSELQR-----QEKELHNSQKQSLELTSDLSILQMSRK-----------------------------------LENQVGSLKEQHLRDSADLKTLLSKAENQAKDV.............................................................................. 300
3 -7.200sp|Q96Q06|PLIN4_HUMAN(removed signalp:1-17) Perilipin-4 OS=Homo sapiens GN=PLIN4 PE=2 SV=2  ali   1..........................GAVQGGLDTTKSVLTGTKDAVSTGLTGAVNVAK--GTVQTGVDTTKTVLTGTKDTVCSGVTSAVNVAKGAVQGGLDTTKSVVIGTKDTMSTGLTGAANVAKGAVQTGVDTAKTVLTGTKDTVTTGLVGAVNVAKGTVQTGMDTTKTLTGTKDTIYSGVTSAVNVAK------------------------GAVQTGLKTTQNIATGTKNTFGSGVTSAVNVAKGAAQTGVDTAKTVLTGTKDTVTTGLMGA---------------NVAKGTVQTSVDTTKTVLTGTKDTVCSGVTGAANVAKGAIQGGLDTTKSVLTGTKDAVSTGLTGAVKLAKG............................................................. 298
4 -7.000sp|P07942|LAMB1_HUMAN(removed signalp:1-21) Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2  ali   12  2VERKVS-EIKDILAQSPAAEPLKKLIKDVTEMMAQVEVKLSDTTSSTAKELDSLQTEAESDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEA-EERVNASTTEPNSTVEQSALMRDRVEDVMMERESQFKEKQEEQARLLDELAGKLQS---GGLVTVAHNAWQKAMDLDQDVLSALA-------------------------EVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKS--EELRNLIKQIRNFLTQDSADLDSI....................................................................................................................................................... 300
5 -6.850sp|Q16363|LAMA4_HUMAN(removed signalp:1-27) Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4  ali   10  1..................LDDYNAKLSDLQEALDQALNYVRDAEDMNRATAARQRDHEKQQERVREQMEVVNMS-LSTSADSLTTPRLTLSELDDII-KNASGIYAEIDGAKSELQVKLSNLSNLSH---------------------------------DLVQEAIDHAQDLQQEANELSRKLHSSDMNGLVQKALDASNVYEN--EANETAEFALNTTDRIYDAVSGIDTQIIYHKDESENLLNQARELQAKAESSSDEAVADTSRRVGGALARKSALKTRLSDAVKQLQAAERGDAQQRLGQSRLITEEANR-TTMEVQQATAPMANNLTNWSQNLQHFDSSAYNTA.......................................................................... 300
6 -6.760sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2  ali   10  1........................DLSTLQEKMAATSKEVARLETLVGEQQETASRELVKPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAR-AELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAK---------------LRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSE-----AAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSAL------ETLQGQLEEKAQELGHSQSALASAQRELAAFRTKV.............................................................................. 299
7 -6.760sp|A6NI56|CC154_HUMAN Coiled-coil domain-containing protein 154 OS=Homo sapiens GN=CCDC154 PE=2 SV=4  ali   10  1..............HEVGPGGRRAEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQML----------------------GLRLSEAKTEWEGAERKSLEDLARWR--------------KEVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKV-GALRQELATLLSSVQLLKEDNPGRKIAEMQGKL-----ATNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWSEEGPRT.......................................................................... 294
8 -6.760sp|Q5ST30|SYVM_HUMAN Valyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=VARS2 PE=1 SV=2  ali   10  81...QVYMELQGLVDPQIQLPLLAARRYKLQKQLDSLTARTPSEGEAGTQRQQKLSSLQLELSKLDKAASHLRQLMDEPPA........................................................................................................................................................................................................................................................................................................................................................ 157
9 -6.650sp|Q8N283|ANR35_HUMAN Ankyrin repeat domain-containing protein 35 OS=Homo sapiens GN=ANKRD35 PE=2 SV=2  ali   3...........KALGGLAKGQLEKEMSVLRLSNSNLLEELGELGRRLQRELQSLSQRLQREFPKPEAQVQLQQLRQSVGL--LTNELAMEKEATEKLRKLLASQSSGLRGLWDCLPADLVGERSAQSKAAESLEELRACISTLVDRHREQVLARLQEENQQLRGSLSPCREPGTSLKAPASPQVAALEQDLGKLEEELRA----VQATMSGKSQEIGKLKQLLYQATEEVAELRAREAASLRQHEKTRGSAQAQAWGQELKALLEKYNTACR........................................................................................................................................................ 265
10 -6.650sp|P06727|APOA4_HUMAN(removed signalp:1-20) Apolipoprotein A-IV OS=Homo sapiens GN=APOA4 PE=1 SV=3  ali follow..  1......................EVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLNALFQDKLGEVNTYAGDLQKKLVPFATELHERLAKDSEKLKEEIGKELEELRARLLPHANEVSQKIGDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRG---NLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQMEQLRQKLGPHAGDVEGHLSFLEKDLRDKVNSFFSTFKEKESQ--DKTLSLPELEQQQEQQQEQQQEQVQMLAPLES........................... 376

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.