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Query: gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNEDYEIYRMNQRLYGQALAQEDLKNWIYSNIFIIKIGTVKEFKHQTQEAIVTIPEFEDLEIHTKNISNISLELSKGDCVLLLQSSINIFDKNNDIHFDKHHFYILSAISPKTLNLISDTVKIRANNKIEIANQTTSLKKILDNIVSAINGIKIIGDSVIDESSLKIATAQINSDINSLFKLast
1 -4.030HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  10  2.......................MRRKNITWVWLLGAAFMVGCGKQVPENIIQPDRMENILYDYHLSISMGNNLSYSDNYQKEAYKNYVFEKHTEAEFDSSMVWYTR--HTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTDVPLANKVTFEIPA... 156
2 -2.900PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  13  2.........................................TLIKGEPGKGIVLKEYQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVRDTEEHTTKDHLFIMS.......................................................................... 73
3 -2.810PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]  ali follow..  17  1.......................FDIYIFNDSTNIPIGTVFSF---SKYDYICNKAVQDI---SEDLIKIELNQN-----VSINKIFNILKASQASENTQN................................................................................ 68
4 -2.580PB078508 A6TV41_9CLOT/1-155 PB078508; Pfam-B_78508;  ali follow..  7  11............................HELFYKEMLARTNQTDVYYKAFFYCMGICETTRKHIEDLFDFKEGGIMPEHLKVTRMAYNLWNGYVEEG-TESLTTPSSLFACEYAAEFHQAIKIR......................................................... 115
5 -2.490PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  11  11.................NIPTSRISKRIPKNSFETNTKLTSAEKKYLANDVKLITLEYSLVQQNIQVPAILDDEYNYSAINIISVQLN............................................................................................. 81
6 -2.420HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  13  117................................................................TQIAKYNTFLENITDCPMEESKKEQW---AEVKCLRAYFFLNLAFYYTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLL............................. 202
7 -1.990PB001232 gi|126647001|ref|ZP_01719511.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi|126577049|gb|EAZ81297.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]  ali follow..  12  2..IQTSFYQEKINEIISPLSRSAFAYYRFQDVLVNKIKVTRSRGERVFEGYIYIIE------DLWAIHSLNLKTSLLGFQIQATQQYAPVAEN........................................................................................ 95
8 -1.950PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  17  197........................................RYFHLQKADLVWPNWQARALYIDFWMLGDAARELPDNSWRELGNLVMNMFDPEDVSTVDKCRKFLQKEFFDKY.................................................................... 274
9 -1.670HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  5  116.........................................TLQLSAASQSVPVGGSLDFTATIVHEGSGNYLVDGSDVLTITSGQETIYKSDVCPADSRL--LLMAKGDKDVQKVTWNTNANATLAKCTDESGWAKVNAGTYVAQLSLKDHPKVKSDPV..................... 235
10 -1.610PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  14  4....................................LLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLVAVLLVVVILYIAGVNQW........................................................................................... 57
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.