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Query: gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGFNMELFDENYYAKAVANIIGEVKDPIMYKWFSPDQIEDVDLQMGYQKTVKWDAFLNANPTTIANEVNTISTIGFSSEVVRLNYLKLQYKFRHLKQTSEKFYTSDSYIGDINNNLLPFAQAYKLASSEIIKLINHFVLTGTVSIQKDGKNQKRLLPNMYGLLNMPEQIKEEVASGDKDKMDKIFEKIEAGLSKLELGDEFSTPMMVIVDPATSLKLVKPYAAAQGAASSCEKWEDVLIQTIKAINNREDVYIETSNLLKHKILIYPLNSELIKFKPSKYMLPTPNEQVDKDSTDVAHSYIDFVLGGLLATRKTILQVNIKQSLast
1 -5.770sp|Q6ZMJ4|IL34_HUMAN Interleukin-34 OS=Homo sapiens GN=IL34 PE=1 SV=1  ali   16  1..................................................................NEPLEMWPLTQNEECTVTGFLRDKLQYRSRLQYMKHYF--------------PINYKISVPYEGVFRIAN-------VTRLQRAQVSERELRYLWVLVSLSESVQDVLLEGHPSEVETLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALLDNCQSSVLNWQD....................................................................................... 170
2 -4.670tr|C9J7R7|C9J7R7_HUMAN Uncharacterized protein OS=Homo sapiens GN=DNTTIP1 PE=4 SV=1  ali   15  2....................................................KWDPARLNESTTFVLGSRANKALGMGGTRGRI-YIKHPHLFKYAADPQDKHWLAEQHHMRATGG----KMAYLLIEEDIRDLAA----------SDDYRGCLDLKLEELKSFVLPSWMVEKMRKYMETLRTENEHRAVEAPPQ................................................................................................................................. 129
3 -4.670sp|Q9H147|TDIF1_HUMAN Deoxynucleotidyltransferase terminal-interacting protein 1 OS=Homo sapiens GN=DNTTIP1 PE=1 SV=2  ali   15  2....................................................KWDPARLNESTTFVLGSRANKALGMGGTRGRI-YIKHPHLFKYAADPQDKHWLAEQHHMRATGG----KMAYLLIEEDIRDLAA----------SDDYRGCLDLKLEELKSFVLPSWMVEKMRKYMETLRTENEHRAVEAPPQ................................................................................................................................. 129
4 -4.600tr|Q32MM9|Q32MM9_HUMAN BBS1 protein OS=Homo sapiens GN=BBS1 PE=2 SV=1  ali   10  1....................................................................................................................................................................NVPRKTRLYVDQTLREREAAMHRAFQTDLYLLRL--------------RAARAYLQALESSLSPLSTTAREPLKLHAVVQGLGPTFKLTLHLQNTVLGLLVCFLYNEALYSLPRAFFKVPLL...................................... 115
5 -4.360sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   1........................................ELATETVYVDDASWMRYIPPIPVHRDFGFGWALVSDILLCLIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLYKRRYIFSVVENLQRLCYMGLLQFGPTEKFQTICDPHYNLARSSRPFERRLYVLNSMQDVENYWFDLQCVCLNTPLG............................................................................................................................. 180
6 -4.190sp|Q8NHS9|SPT22_HUMAN Spermatogenesis-associated protein 22 OS=Homo sapiens GN=SPATA22 PE=1 SV=2  ali   11  10...............................................................................................................................................................................................................................................MKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEIDRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPA 94
7 -4.090sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3  ali   12  10...................................................................................................................................................KSSKKSIFVLPN--------DDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAKAPPGGGTTSETEITTTEIIKRRDV--GPYGIRSEYCIRKIICPI....................................... 141
8 -3.990sp|Q9UIL8|PHF11_HUMAN PHD finger protein 11 OS=Homo sapiens GN=PHF11 PE=1 SV=3  ali   17  17.....................................................................................................................................................................................LNYLLEEILDKVHSIP---------KLMDETTSE----SDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI----------LLQDLKQTLCSFQENRDLMSSSTSISSLSY.................... 118
9 -3.980sp|Q8TBJ5|FEZF2_HUMAN Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2  ali   12  6............................................................................................................................................................LPCMIPLQPLGYEVPSKTLLSYSELWKSSLRA-ASGLCKTNCGVCCKAELGLAPSALPAGRVIKPQVINQAVGLPA-------SGSLYYFNYLDSTAYPPSELLS----GHLFPSGLLNAQAPAALAAHPKLFLLENAK............................. 153
10 -3.960sp|O15050|TRNK1_HUMAN TPR and ankyrin repeat-containing protein 1 OS=Homo sapiens GN=TRANK1 PE=2 SV=4  ali   12  50..............................................................................................................................SIGNTVALLEFQFIHCGVVLARLWKNVILCLPKSY---KELGDVFSIIQEYKPKDVTRAIQDFRFHLSYL----------VLCGYENVNFNVLLDAFSEIDYVVSGEAERTLVLCLVMLVNAEEILQPYCKPLLYRHFREIESRLQLMSMDCPGQVPERLLKVVKRVLVAVNVKSVAEALQDLLFERDE......... 242

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 4 7 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.