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Query: gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MCGGCLMNGVRKRLSDMSFRMINVFKDPKPLKFYKGTVVKLENDSSYQRVFDKTKYIEFAGVIIDIKPQELAILYDSDMSDIQGYSKLYTYQDLNYEPKDRISIADLVYFEIFSIDSSIGYFTLVLKEFIWTNLast
1 -8.540tr|E9PH94|E9PH94_HUMAN Uncharacterized protein OS=Homo sapiens GN=C5orf42 PE=4 SV=1  ali   46  39LCALCWMLHVRDKLS...................................................................................................................... 53
2 -5.350sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1 SV=3  ali   36.CGVYTPQGFLDQWASNASVSHQDQQCPGWVIIGQPAASQVCRTKDLSEGISQHAWYPCTISYPYSQLAQTTFWLRAYFSQPMVAAAVIVHLVTDGTYY---GDQKQETISVQLLDTKDQSHDL......... 157
3 -5.260sp|Q9H799|CE042_HUMAN Uncharacterized protein C5orf42 OS=Homo sapiens GN=C5orf42 PE=2 SV=3  ali   11  39LCALCWMLHVRDKLSYSCRQ----YQKARENVKGEKDLEVEFDSCMIEHCLSAVEWAYRMLPFSRFFNME------------ELIQDIILSLIGELPPIRKVAEIFVKAFEDVRVPLRDKYHSLHQR...... 152
4 -5.120sp|Q8N196|SIX5_HUMAN Homeobox protein SIX5 OS=Homo sapiens GN=SIX5 PE=1 SV=3  ali   12  11VCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEESRPFPAAHHAFLQDLYLRARYHEAERA........................................................... 92
5 -4.930sp|O95343|SIX3_HUMAN Homeobox protein SIX3 OS=Homo sapiens GN=SIX3 PE=1 SV=1  ali   11  25VCETLEETGDIERLGRFLWSLCEAINKHESILRARAVVAFHTGNFRENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVD---KYRVRKKFPL..................................... 129
6 -4.840tr|E7ETP3|E7ETP3_HUMAN Uncharacterized protein OS=Homo sapiens GN=LHX3 PE=3 SV=1  ali   16  2......................................................................PWPPLLSSLVYPDTSLGLVPSGAPGGPPPMRVLAGNGPSSDL-STGSSGGYPDFPASPASWLD 63
7 -4.680sp|O95475|SIX6_HUMAN Homeobox protein SIX6 OS=Homo sapiens GN=SIX6 PE=1 SV=2  ali   17VCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHGGNYREESHAKLQALWLEAHYQEAEKLRGRPLGPVD---KYRVRKKFPL..................................... 121
8 -4.650sp|O75717|WDHD1_HUMAN WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens GN=WDHD1 PE=1 SV=1  ali   1......IGGVQKEVFSLAGPVVSMAGHGEQLFIDQCLGVQLLELGKKKKQILHGDPLPLTRAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKG..... 136
9 -4.640sp|Q8N3J3|CQ053_HUMAN Uncharacterized protein C17orf53 OS=Homo sapiens GN=C17orf53 PE=2 SV=1  ali   67............................................................................TGEMQGTVHRLLLETCQNELKPGSVLLLKQ---IGVFSPSLRNHYLNVTPNNLV... 117
10 -4.630tr|C9J536|C9J536_HUMAN Uncharacterized protein OS=Homo sapiens GN=IP6K2 PE=4 SV=1  ali   1.......................................................................................IFVKFADEFGASGNIETKELGVVSVRFEEDEDRNLCLIAYPL.... 42

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.