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current user: public |
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| Query: gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31], from B.burgdorferi |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
| # | Score | Template | Links and tools | %id | First | MDKLEFKMELEIGWFGGRAGIAKMHEKGSSNLPARKHLTKIASSSEFREYINNSYINSKFNLDPKSGMEAIGQAFIRYYENYLLSAQVTPALKANTIKSKFKRGSNTAAIPLVDTAKMLSEITYKVTLE | Last |
| 1 | -6.350 | sp|Q8WY54|PPM1E_HUMAN Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=2 | ali | 13 | 1 | ............................SERITPRPLSERITREEVEGESLDLCLQQLYKYNCPSFLAAALARATSDEVLQ-----------SDLSAHYIPKETDGTEGTVEIETVKLARSVFSKLHE. | 89 |
| 2 | -6.060 | sp|Q9GZN8|CT027_HUMAN UPF0687 protein C20orf27 OS=Homo sapiens GN=C20orf27 PE=1 SV=3 | ali | 8 | 20 | .....SSFLVKVGFLKILHRYEI-----TFTLPPVHRLSKDVREAPVPSLHLKLLSVVPVPEGYSVKCE-YSAHKEGVLKEEILLACEGGTGTCVRVTVQARVMDRHHGTPMLLDG............. | 124 |
| 3 | -5.370 | sp|O75161|NPHP4_HUMAN Nephrocystin-4 OS=Homo sapiens GN=NPHP4 PE=1 SV=2 | ali | 14 | 19 | FARYLAVQTLQIDVWDGDSLLL----IGSAAVQMKHLLRQGRPAVQ................................................................................... | 60 |
| 4 | -4.990 | sp|Q5T0Z8|CF132_HUMAN Uncharacterized protein C6orf132 OS=Homo sapiens GN=C6orf132 PE=1 SV=4 | ali | 25 | 50 | ............GIYYGDNRFNTVSESGTATLKARPRVR.......................................................................................... | 76 |
| 5 | -4.470 | sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3 OS=Homo sapiens GN=PIGO PE=2 SV=3 | ali | 10 | 6 | ................................PVTVLVKAGAGAPRTRTVLTPFSGPPTSQADLDYVVPQIYRHMQEEFRGRLERTK.......................................... | 60 |
| 6 | -4.390 | sp|Q9NRM1|ENAM_HUMAN Enamelin OS=Homo sapiens GN=ENAM PE=2 SV=3 | ali | 17 | 49 | ............GFSSKSEEMMRYNQFNFMNGPHMAHLGP......................................................................................... | 76 |
| 7 | -4.120 | tr|B4DET3|B4DET3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NPC1 PE=2 SV=1 | ali | 8 | 3 | ........................RYFVSEYTPIDSNIAFSVNASDKGTAWLLTSTFPSSPVLPGEACDPVSAAFEGCLRRLFTRWGSFCVRNP................................... | 74 |
| 8 | -3.980 | sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1 | ali | 11 | 21 | ............................GQDPPQRTVLGLLTANGQYRRTCGQGITRIRCYSGSENAFPPAGKKALPDCGVQEPPKQMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHFLL... | 123 |
| 9 | -3.950 | sp|Q53EU6|GPAT3_HUMAN Glycerol-3-phosphate acyltransferase 3 OS=Homo sapiens GN=AGPAT9 PE=1 SV=2 | ali | 7 | 1 | ............................................................DFELSDVFYFSKKGLEAIVEDEVTQRFSSEELVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCV... | 66 |
| 10 | -3.920 | sp|Q92665|RT31_HUMAN 28S ribosomal protein S31, mitochondrial OS=Homo sapiens GN=MRPS31 PE=1 SV=3 | ali | 13 | 9 | ...............................LPLRPLSRHPLSSGSPETSAAAIMLLTVRHGTVRYRSSALLARTKNNIQRYF.............................................. | 60 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83. |