current user: public

If you have questions about the server, please let us know.

Query: gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290
# Score Template Links and tools%idFirst MSIVFDSDFGILKRTIKDIVRAKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISSKSTTYSAVRNALLNLDGIEYTNIKSAAGKANIYLILKETLLDTSKSNINSPEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFNMTDRLLIDIGLast
1 -4.880sp|Q96PN6|ADCYA_HUMAN Adenylate cyclase type 10 OS=Homo sapiens GN=ADCY10 PE=1 SV=3  ali   25LDILLY--SGFVYRTFEECLEFIHQYENN---RILKFHSGLLLGLYSSVAIWYARL---------QEWDNFYKFSNRAKNLLPRRTMTLTYYDGISRYMEGQ............................................................................................................................................................................................. 112
2 -4.740sp|A6NKB5|PCX2_HUMAN Pecanex-like protein 2 OS=Homo sapiens GN=PCNXL2 PE=1 SV=3  ali   38............................................................................................................................................................SEVAVTLIDTSQPGDPLSLHEP------IKIVITMSSTPNSMTDLESSLHLRVV................................................................................. 85
3 -4.490sp|Q8NEN9|PDZD8_HUMAN PDZ domain-containing protein 8 OS=Homo sapiens GN=PDZD8 PE=1 SV=1  ali   10  15.....................................................................................................................................NGGFHLAIDVDLVFGKSAYLRVVGRLRLVFTRVPFTHWFFSFVEDPLIDFEVRSQFEGRPMPQLTSIIVNQLKKIIKRKH.............................................................................. 99
4 -4.260sp|Q9NR99|MXRA5_HUMAN Matrix-remodeling-associated protein 5 OS=Homo sapiens GN=MXRA5 PE=2 SV=3  ali   7............................................................................................................................................................WSISLNMTDEHGNMYKIHLNQTDPPDIDINATVALDFECPMTRENYEKL--KLIAYYSEVPVKLHRELMLSK-YRQDADEEALYYTGVRAQILAEPE...................................... 121
5 -3.960tr|C9JFV4|C9JFV4_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   14  87...........LRQRFSGLARCLGLMLSSEFGAPVSVPVQEILDFICRTLSVSSKNIVSGICHLFRALAQDTR.......................................................................................................................................................................................................................... 148
6 -3.960sp|O43897|TLL1_HUMAN Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1  ali   2.......................................................................................................................................GLGTLSPRMLVWLVASGIVFYGELWVCAGNEEDKTETIDYKDPCKAAVFWDIALDDEDLNIFQIDRTIDLTQNPFGNLGHTTGGLGDHAMSKK............................................................... 104
7 -3.840sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3  ali   1..........................................................EKFFTLCHSLESQVTFPIRVLDQKISEMALEHELKLSIICLNSSRLEPLVL------------DKLFQLSVQPMVIAGQTANFSQFAFESVVAIANSLHNSKDLSKDQHGRNCLLAFRLP................................................................................................................. 120
8 -3.840sp|Q6ULP2|AFTIN_HUMAN Aftiphilin OS=Homo sapiens GN=AFTPH PE=1 SV=2  ali   20  6...................................................WSSSGLTNPLDASGGSTLLNLDFFGPVDDSSSSSSTTIPGVDPELYELT............................................................................................................................................................................................... 54
9 -3.810sp|P52333|JAK3_HUMAN Tyrosine-protein kinase JAK3 OS=Homo sapiens GN=JAK3 PE=1 SV=2  ali   25..........................................................................................................................................PEIVDISIKQAPRVGPAGEHRLVTVTRTDNQILEAEFPGLPEALSFVAL........................................................................................................ 73
10 -3.630sp|Q96NX9|DACH2_HUMAN Dachshund homolog 2 OS=Homo sapiens GN=DACH2 PE=2 SV=1  ali   24  44.....................................................................................ADSLSSVETLLTNIQGLLKVAL-DNA.................................................................................................................................................................................... 68

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 4 7 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.