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Query: gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKVQLKNALLNCIISYRFHGIGYVLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFDHITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVPCYTESFLLDIYLFEKIYVEIERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSKDISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIGADTKEPLTRSFNEQAKGLGNDGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNSLIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAMLKEKLFSFLast
1 -5.070sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3  ali   22  1................................................................................................................................................................CKTQVAELELWL-QQANVAVEPETLNADMQQVLEQQLVGCQAMLTEIEHKVAFLLE----------------TCKDQGLGDNGATQHEAEALSLKLKTVKCNL................................................................................................................................................ 86
2 -4.520sp|O60716|CTND1_HUMAN Catenin delta-1 OS=Homo sapiens GN=CTNND1 PE=1 SV=1  ali   10  1.................................................................................................................................................................................................................................................TTVKKVVKTVTTRTVQPVA--MGPDGLPVDASSVSNNYIQTLGRDFRKNGNGGPGPYVGQAGTATLPRNFHYPPDGYSR....................................................................................... 77
3 -4.390sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3  ali   20  23...........................HLSNLTHDILHAIINFDSPPHPDIQSNKVYVMHTLAASLSACI................................................................................................................................................................................................................................................................................................................................................. 65
4 -4.280tr|Q58HM9|Q58HM9_HUMAN Programmed cell death 2 isoform 2 OS=Homo sapiens GN=PDCD2 PE=2 SV=1  ali   19  2..................................................................................................................................................................................HLDHIIPDHNFLFPEFEIVIETEDEIMPEVVEKEDYSEIIGSMGKQF...................................................................................................................................................................................... 48
5 -3.880sp|Q96CP6|GRM1A_HUMAN GRAM domain-containing protein 1A OS=Homo sapiens GN=GRAMD1A PE=1 SV=2  ali   14  21..........................................................................................................................................................................................QQMLFSDSPFLQGFLQQCKFTDVTLSPWSGDSKCHQR-ISNPLGPKSASVVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTLARNKARLRVSSEIRYRKQPWSLVKSLIEKNSWSGIEDYFHH.............................................................................................. 162
6 -3.840sp|Q2KJY2|KI26B_HUMAN Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF26B PE=1 SV=1  ali   15  1........................................................................................................................................................................................EPFEIKVYEIDDVERLQRRRGGASKEAMCFNA--------------KLKILEHRQQRIAEVRAKYEWLMKELEATKQYLMLDPNKWLSEFDLELEALECVTERLESRVNFCKAHL............................................................................................................ 111
7 -3.810sp|Q8IYS0|GRM1C_HUMAN GRAM domain-containing protein 1C OS=Homo sapiens GN=GRAMD1C PE=2 SV=2  ali   14  16..........................................................................................................................................................................................FELLFTSSRFMQKFASSRNIIDVVSTPWTAELGGDQL-LNSPLTGKCTAATEKQTLYKESREARFYLVDSEVLTHDVPYHDYFYTSSKQKCRLRVSTDLKYRKQPWGLVKSLIEKNSWSSLEDYFKQLESDL......................................................................................... 162
8 -3.720tr|F5H3K6|F5H3K6_HUMAN Uncharacterized protein OS=Homo sapiens GN=SPI1 PE=4 SV=1  ali   12  10.............................................................................................................................................................................................................................................................................FPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHSEFESFAENNFTELQSVQPP.................................................................... 79
9 -3.710sp|Q96TA1|NIBL1_HUMAN Niban-like protein 1 OS=Homo sapiens GN=FAM129B PE=1 SV=3  ali   23  11............................................................................................................................................DARRQHIAEKTGKILTEFLQFYEDQY--GVALFNSMRHEIEGTGLPQAQLLWR...................................................................................................................................................................................................................... 61
10 -3.640sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1  ali   13  29...........................................................................................................................................................................................................................................................FLRYINRFQDAVLANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLNPSRLQDVTVLS........................................................................................ 96
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Jaroszewski L, Li W, Godzik A. Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Sci. 2000 Feb;9(2):232-41.