FFAS03 results for 11497102

Query: gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180`
#	Score	Template	Links and tools	%id	First	`MNEDYEIYRMNQRLYGQALAQEDLKNWIYSNIFIIKIGTVKEFKHQTQEAIVTIPEFEDLEIHTKNISNISLELSKGDCVLLLQSSINIFDKNNDIHFDKHHFYILSAISPKTLNLISDTVKIRANNKIEIANQTTSLKKILDNIVSAINGIKIIGDSVIDESSLKIATAQINSDINSLFK`	Last
1	-6.280	`sp\|A6H8M9\|CDHR4_HUMAN Cadherin-related family member 4 OS=Homo sapiens GN=CDHR4 PE=2 SV=1`	`ali`	14	55	`.........................................ARWQGTYVGKLTLSSSAQLDALMVNHYKVQLKFTCGNHVMEGSLSVDVQRDLSH......................................................................................`	108
2	-6.140	`sp\|A2VDJ0\|T131L_HUMAN Transmembrane protein 131-like OS=Homo sapiens GN=KIAA0922 PE=1 SV=2`	`ali`	25	3	`...........................................AKQLPNAYFLLPKVQSIQLETTNTSLLQVQLEESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHL........................................................................`	89
3	-5.880	`sp\|Q709C8\|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1`	`ali`	9	12	`................................LIHEDGIIRPYDRQESEGSDLLENHIKKLEGETYRYHCAIPGSKKTILMVTNRRVLCIKEVE.......................................................................................`	73
4	-5.170	`sp\|Q96RL7\|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2`	`ali`	10	13	`................................FFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYF-THVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVKSVFHAREFGKIIN......................................`	122
5	-5.080	`sp\|Q7LBC6\|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2`	`ali`	17	2	`...................................RAGTVRAMSGAVPQDLAIFVEFDGCNWKQHSWVKVH---AEEVIVLLLEGSLVWAPRED.......................................................................................`	57
6	-4.910	`sp\|P52747\|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2`	`ali`	17	13	`..............................................TQDGTPITVPAHDAVISTHSVAMVTAEGTEGEQVAIVAQDLAAFHTASSEMGHQQHSHHLVTTETRPLTL------VATSNGTQIAVQLGE-QPSLEEAIRIASRIQQGETPGLDD...................`	124
7	-4.820	`sp\|Q8TC57\|CB065_HUMAN Uncharacterized protein C2orf65 OS=Homo sapiens GN=C2orf65 PE=2 SV=1`	`ali`	12	35	`.......................................................DWDELETNQQHFHALCHSLLKREWLLLAKGEPPGPGHSQRIPA--STFYVIMPSHSLTLAVATRELMLPSTFPLLPEDPHDDSLKNVESMLDSL................................`	129
8	-4.790	`sp\|P14543\|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3`	`ali`	9	20	`............................IDAVYVTTNGIIADLDTTDGLGKVYYREDLSPSITQRAAECVHRGFPEISAVVVTWESVAPYQGPSRDPDQKG................................................................................`	123
9	-4.770	`sp\|Q8N3J3\|CQ053_HUMAN Uncharacterized protein C17orf53 OS=Homo sapiens GN=C17orf53 PE=2 SV=1`	`ali`	20	46	`....................................AVMIKSLTRSTMDASVVFKDPTG-TVHRLLLETCQNELKPGSVLLL--KQIGVFSPSLRNHY...................................................................................`	108
10	-4.730	`tr\|B4DHZ3\|B4DHZ3_HUMAN Uncharacterized protein OS=Homo sapiens GN=CARNS1 PE=2 SV=1`	`ali`	12	1	`..............................EVTLCVLGSPSTFLPVLLEGGVQSPGNMLLCLSPAWLMKVPAPGQPGEAALLVSKAVS-FHPGGLTFLDRRATYFLAGLGLREAAELARDLTCPTGASAELARLLED-RLLTRQLLAQQGGVAVPATLAF.....................`	138

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster