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Query: gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .
# Score Template Links and tools%idFirst MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNYRAGVFYENALEFSINFQIYIIAIVLNAKDFDANSRMLMLYSMLSDFLHNKAHKYNLPSLQPDYINKINFYIYPTSNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKEEYEIAARYNLast
1 -110.000PF05561.11; Q9S0C9_BORBU/1-180; Borrelia burgdorferi protein of unknown function (DUF764 topsan)  ali follow..  92  1MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNSRAGAFYENALEFSLNFQIYIIAIVLNAQDFDANSRMLMLYGMLSNFLHNKAHKYTLSQSQPEYISKVNFYIYPISNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKE......... 180
2 -7.260PF17016.5; L2GX47_VAVCU/13-239; Domain of unknown function (DUF5095 topsan)  ali follow..  12  59....................KIVSKKKLKGKHVEYFKFPFNTNIKNDSSDLYSLIYMEWLIAIT------SAFKNYRNRNEEFYIKF------LDKLLIFSTDLYCSSACKEILDQLEIQYVDENSL--TGVGISLMYDYVINYELKPKDRMPFILSRHKFTNAISYESRFTESLMVRDRGVLKCYY. 214
3 -6.930PF13068.6; A0A073K3T1_9BACI/1-81; Protein of unknown function (DUF3932 topsan)  ali follow..  15  5........................................................................FRLQTDFSSSFDVWASSFVSETPTH---------WSTLKELIHEYTALHTLQPVPERISSSITYYAQRVSSPSNTEIIFYENSH................................ 81
4 -6.750PF00565.17; NUC_STAIN/62-168; Staphylococcal nuclease homologue  ali follow..  13  28...........................................................................................................NFTKKHLTNQRVRLEYDREPKDKYGRTLAYVWLGDEMFNVKLAKEG-------LARAKFYPPNDKYRILIEQAQKEAQKKQ 101
5 -6.320PF01184.19; A7TND9_VANPO/71-277; GPR1/FUN34/yaaH family  ali follow..  13  50LIVGLAMFYGGLMQTIAGIWEIALENTFGGTTLCSYGAFWLSFGAIYIPWFGIL---------------EAYTAKPSDLNNALGFYLL-----------------GWAIFTLGVVICTMKSTVLFFGLFFMLFMTFLLLCIASFSGRHSVQVAGGVFGVITAFIAWYNAYAGLAT............. 192
6 -5.940PF11447.8; Q5JEW8_THEKO/12-162; Protein of unknown function (DUF3201 topsan)  ali follow..  11  3....LNKLWEDVFTLNEELKEELPRFGFKVEDVEEVFGAYLFLDGEWRQMLYPHPAFEVKPQ---------------EVGATPESYYFVVAVPKEKIS------------EDFLEAFLEAFPKSFIYGSEDFLNDVYNCMRDSPLSEEIIKRIHESSEKVFQFEANFDDVEKLKEGLFK......... 151
7 -5.910PF02352.15; DBPA_BORBU/32-171; Decorin binding protein  ali follow..  10  48................................................................................................LEAKVRATTVAEKFVIAIEEEATKLKETGSSGEFSAMYDLMFEVSKPLQKLGIQEMTKTVSDAA-NPPTTAQGVLEIAKKMREKLQRVHTKN 140
8 -5.760PF11514.8; U5L8B5_9BACI/4-101; Protein of unknown function (DUF3219 topsan)  ali follow..  14  40..........................................................................................................YHDITTLLYDLYFDVSVPEDALEFRGMIDKYYTSLTNLYEED........................................ 81
9 -5.720PF18598.1; D9V026_9ACTN/97-207; Tetracyclin repressor-like, C-terminal domain  ali follow..  7  6...........IAEAIGAFVRTVNASPPFRAFLRREPERALRLLTTKASLVQSRTIEKLQALLTDEVTAGRLESPLPVADLAYLLVRVSFIYTDAITGEEPDAEKALVAAKMLLR......................................................................... 111
10 -5.360PF13840.6; C3Y7V2_BRAFL/72-142; ACT domain  ali follow..  16  26...........ITKIAKALILPLAEAQVPVFVMSTYQTDFILVQEKDLDTSIEC...................................................................................................................................... 68
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.