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Query: gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNYRAGVFYENALEFSINFQIYIIAIVLNAKDFDANSRMLMLYSMLSDFLHNKAHKYNLPSLQPDYINKINFYIYPTSNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKEEYEIAARYNLast
1 -6.480d2jn9a1 b.45.3.1 (A:3-97) Uncharacterized protein YkvR {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  15  36..........................................................................................................YHDIAVLLYEKTFNVEVPERDLAFRGEMTNYSTSLTNLYEPGAVS..................................... 80
2 -6.010d3k2za1 a.4.5.0 (A:3-71) automated matches {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  7  1.................................................................................................DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALLHLIALEKKGYIERKNGKPR-----------ALRISKSI........... 69
3 -5.610d5n5da1 c.66.1.0 (A:1-222) automated matches {Streptomyces regensis [TaxId: 68263]}  ali model 3D-neighbors follow..  6  39..LAVSAPQGKLLHLLARLRQ--ARRILEIGTFGGYSSIWLARALPPDGRLVTIEWERSFAESAASRLAEAGVAHLVEQHVGRAL----------------------DILPTLDRPGTAPFDMVFVDANKPDIPEYFTWALKLSRPGAVVVVDNVVLGGAVTDPDHPDAGVQGVRRFHEMLAGRSDVT 200
4 -5.470d3b9oa_ c.1.16.0 (A:) automated matches {Geobacillus thermodenitrificans [TaxId: 33940]}  ali model 3D-neighbors follow..  14  84............LMLISAMAYVTKHLAFAVTFSTTYEHPYLDHLTKGRINVVTSHLPGIKKILEHDER----YDLADEYEVCYKLWEGSWEDNAVIRDIENNIYTDPSKVHEINHSGKY-FEVPGPHLCEPSPQRTPVIYQAGMSERG-REFAAKHAECVFLGGKDVETLKFFVDDIRKRAKKYGR.. 268
5 -5.470d4r3va_ d.92.1.0 (A:) automated matches {Tannerella forsythia [TaxId: 203275]}  ali model 3D-neighbors follow..  10  46.............AIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNTGILAH-----AFYPPPAGGNYAGHLHF-------DGDENWSINGSGIDLITVAAHAIGHLLGIEHSNVSSALMYPYYTGIKRQLDNDDCLAVWDLYGY.............................. 178
6 -5.190d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  13  13............................DLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-------VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKFKE......... 156
7 -5.000d1zvpa2 d.58.18.9 (A:68-131) Hypothetical protein VC0802 {Vibrio cholerae [TaxId: 666]}  ali model 3D-neighbors follow..  16  16...........AVGLTAAFATKLAEHGISANVIAGYYHDHI................................................................................................................................................... 45
8 -4.730d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]}  ali model 3D-neighbors follow..  8  118....IRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPD--------GLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVR.......... 284
9 -4.700d1tvla_ c.1.16.4 (A:) Putative monooxygenase YtnJ {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  12  75............ITILSALASVTKNIGLVGTFSTSFTEPFLDHISGGRANLVTSPQESKSNLPEHTER----YEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKY-FQVEGPLNIGRSKQGEPVVFQAGSSETG-RQFAAKNADAIFTHSNSLEETKAFYADVKSRAADEGR.. 258
10 -4.670d5a5sa1 a.29.2.0 (A:44-168) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  18....................................................................................................NQLQYLLRVVLKTLWKHKFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIK--KRLENNYYWNAQECIQDFNTM------FTNCYIYN 97
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.