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current user: public |
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Query: gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31], from B.burgdorferi |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 | |||||||
# | Score | Template | Links and tools | %id | First | MPQDTISVSLLDSRIQASRPNYYNPLLVYKTAKIKVNKDAASYKILNLTVNNYEKQIETLEKENGNGEDQFGKEKTLLKTAMSNFFNSSEESLKSADLFIYKDKPEELKNYLKVHRHTFVVLINTEGDASDDGLKIYKDDYNKFKKPSTFFVFSTKEQEIKELFKDKGNTEKERNIAVYSNNKDNLHLKFISQYLHQASIFHAVNPYGMPLAATPLVDDTVIGKLRTAKINFYSLLNETGLDGVPAFKEGVDLAGGAIDEQFTYHYIKNEAIIELIRIWNKNNRQNSKLSALQLSGARDNAYTSAIECLLKRFVDRGLIIEYKNLRLTLSPTPQLKLELSVNITYNFSINAVALVITTQDIVDYQNSLSA | Last |
1 | -5.950 | [O] COG3175 Cytochrome oxidase assembly factor | ali follow.. | 12 | 33 | ..........................................................................................................................................................................................................VVMMFGFGYAMVPLYK---------------KICELTNINVLTTFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAIPSYAPKQATEFFKKIECFC-----------FKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIGKPVAQTPT | 196 |
2 | -5.920 | [T] COG5040 14-3-3 family protein | ali follow.. | 16 | 5 | ....................................REDSVYLAKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETE-KISDDILSVLDS-----------HLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNASLEAYKTAS--------IATTELPPTHPIRLGLALNFSVFYYEIQNSP-DKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRLWTSDMSESGQ.................................................................................. | 242 |
3 | -5.050 | [R] KOG4733 FOG: RRM domain | ali follow.. | 13 | 3 | ..................................KVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSS--NSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVS---------TKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSS-----TSRGVGFARMESTEKCEAVIGHFNGKFIKTPPG................................................................................................................ | 211 |
4 | -4.870 | [O] KOG0841 Multifunctional chaperone (14-3-3 family) | ali follow.. | 15 | 3 | ....................................KNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIE--TELRDICNDVLSLLEK-----------FLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAF--------ISKKEMQPTHPIRLGLALNFSVFYYEILNSP-EKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRLWTSDTQGDEAEAGEGGEN.......................................................................... | 245 |
5 | -4.470 | [Z] KOG3155 Actin-related protein Arp2/3 complex, subunit ARPC3 | ali follow.. | 16 | 32 | .PTVDIPNDIIDESLYFWKSNIF-----FRTYEVKSEVD----RVLIYITLYITECLKRLARCTSKSQG----QQELYTLAISRFDIPGDAGFPLNGIYTKPEDPELMRQYFLQLRQETGNRLLEKVFDTPDG------------KPSKWWICFAKKKFMEKSLSGPG.......................................................................................................................................................................................................... | 173 |
6 | -3.890 | [S] COG4866 Uncharacterized conserved protein | ali follow.. | 14 | 118 | ...........................VYSIEELQFLTNHANFVYEKISPQNKKEVLEASQAESQTDDIGLINENKGIQSVLENYESLDVKGGEIASFSFIAGAYQIINQQLLLNEFSHLTYANREEDLGLEGLRRSKMSYNPVFLIDKYEA.......................................................................................................................................................................................................................... | 286 |
7 | -3.840 | [S] KOG3236 Predicted membrane protein | ali follow.. | 20 | 2 | ......................................................................................................................................................................................................TLFHFFNPHAVYYSATPLSEYDTLGTSVKAAVVYLTFLQVSETEVFDPYQEALKAMIGFIDVAGLYYALAQLT--------HRNISQNHKFQAVGLGWAFADSVLHRLAPLW--VGARGLEFTWDYVLQGLEANANLVFTISLAA........................... | 154 |
8 | -3.820 | [S] COG3826 Uncharacterized protein conserved in bacteria | ali follow.. | 10 | 166 | .....................................................................................................................QVAILLSEPGADFTGGEFVMTEQRPRMQSRPDVV------------------PLRKGDAAVFAVSQRPVQ----ARGPYRVTMRHGVSRLGQRHTVGIIFHDAL..................................................................................................................................................... | 250 |
9 | -3.790 | [M] COG5632 N-acetylmuramoyl-L-alanine amidase | ali follow.. | 10 | 1 | ...............................................................................................................MKKLVKSAVVFASLALIGTSATLITEKASASSIE--------TVQKVDDQSIYIPQGIRDGTATEEHDGFEDETNSVLKTTSLLRATTGYPDVNAY---IKSNKFSTASIEKQLKSQFPKFGVVIHETANNSSTIEGE-ISYMSRNYNNAFVHSFVDKSRIIQIHGVWGAGQYANARFIQVELVRSKTRSINNYAYYAAYLLDQYKL.................................................... | 214 |
10 | -3.590 | [S] KOG1008 Uncharacterized conserved protein, contains WD40 repeats | ali follow.. | 12 | 483 | ......................................................................................................NNSNKLICYRSEQRDLALQLCGWAFEQELDRFIDQLYANKEYSRAAMICVFHLKIFHACNILSSAADNMRDPSLSSFNADRCSSTWRNQRSSANM----QIHDPH------------AVFSFLTMEKDNFDAVLKEEGV----SLSDRMAFA---------CKYLSETKLADYVAQQIQAAIDGGDLNGLLLTGESQDGID-----ILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQ-SYLDHLNSWGLWEKRAELDIKIESIRP | 729 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |