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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -7.260IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  13  1............................................................................................................................................................................................................................................MKKKFVYLLLLVLFMTVLPFQMLEAQAASTSWIEQELDGNEPFIAETEADLETIQ-GADSIPNKILTALEANYGTITEV--PESVGSLKELVTLLQEFPMVIFQLPKLEVLYISRGNITE. 145
2 -6.870IDP91725 gene: C1orf94; hypothetical protein LOC84970 isoform b [Homo sapiens] NP_116273 [Homo sapiens]  ali follow..  21  1....................................................................................................................................................................................................................................................MPVISSRQDCDSAT---STVTDILCAAEVKSSKGTEDRGRI-------DSNLQVSKLLSQF---LKSTETSKVP---DNKNVLDKVTKDFDNLFSGPGPKEPTGLSPFLLL.. 102
3 -6.820IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  15  33......................................................................................................................................................................................................................................................................EQTMNNNEPFIKEIETETGKTRANITQTD-AITALRVTGASDIPANIDMLTHLTLPNSVGNLKELKILLSNFPTIVYQLPKLEELQLNDGTIEE. 144
4 -6.760IDP01046 putative methyl-accepting chemotaxis protein STM3138 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  14  62...................................................................................................................................................................................................................................................IIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITE-IGTTSSDIGCRMGDLNTSL-TQINACIKEIQKIANQT---NLIAINSAIEDAGRGFSVISKEKNLSEDVKHSSK. 175
5 -6.550IDP95064 methyl-accepting chemotaxis protein, partial [Campylobacter jejuni] AGM39603 [Campylobacter jejuni]  ali follow..  13  75.....................................................................................................................................................................................................................................................ENVNKAEVISSYSKTSLAEMDELNHIANSINASL-RNITESANKTRDVAGTLHRSV-DEITNVINLIKDVSDQT---NLLALNAAIEEHGRGFAVVADERKLA-TQKATTE. 187
6 -6.390IDP04381 unnamed protein product [Shigella flexneri] CAC05791 [Shigella flexneri]  ali follow..  17  191...........................................................................................................................................................................................................................................................................FVSVSEKIARIVMANYSRNWSNSELA-SSLKRRMYKEVGSISTFVHKIKLTEAIRKLRRTNTPISVISKVFFKYLKTYPQNIRKKN.... 294
7 -6.230IDP05103 putative exported aminodeoxychorismate lyase [Clostridium difficile 630] CD1226 [Peptoclostridium difficile 630]  ali follow..  111..............................................................................................................................................................DGIKVTIPEGATSKE--------IIAMLVSKNLGDKATFENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDS-DKFKKKQKELNMTLQESIIEKEAVLDKRLKVGMPLIQYIFEERKKIVTYDYNSYKKGLPP---PISNPGIKSIEAALYPEKNNYSTNYQDHLKYVKE...... 337
8 -5.930IDP06537 Surface protein from Gram-positive cocci, anchor region [Enterococcus faecium DO] EAN08832 [Enterococcus faecium DO]  ali follow..  18  55.......................................................................................................................................................................................................................................................................HVFAKNKTTVNAHDG-------NI-----ATHELDAK--NNFGTYIQKTDSFANSSGIPTGSTRMNKF---------VGSNVDVALQDGHPT.. 137
9 -5.920IDP06223 hypothetical protein HP0439 [Helicobacter pylori 26695] NP_207237 [Helicobacter pylori 26695]  ali follow..  28  1................................................................................................................................................................................................................................................................................MSKRSEVLEQFHGGLKNLE-----LQTK-MGLWGDPKEN----EEQTLF--LEEIENELKQLE-------NKENLKADNNT.... 64
10 -5.820IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  12  52..............................................................................................................................................................................................................................................................SEDLGGQTWLINEVNRQLAPKTVDVNLTFEDKITTISLNNRSLTGEVPPEIKN-LVSLQRLY-PAELGELTKLTELRLDYNELSGKIPDGSEIALQNNRLVG. 167

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 4 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24