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Query: gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIQYNGITLLRDEDGTPMQVNIDLRVHGTELDAFMRAHGLTAQEQSEMLRSVTGEDISPTYVAGGKVQQHVRYLPEMKRQIQTETDRLFVSPRTRPVSVIRKEFPDLLLHRIVRVLTPIPRTKAATPKAFERYCGRDTFWVRFKMQGMMNVTWCVFFTIHDEGIVLVRHLAGAGENDEDLLast
1 -6.110IDP01226 Peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) BA_4187 [Bacillus anthracis str. Ames]  ali follow..  13  53YSLRPGIGLAAPQIGISKKFNPKIISHSVERTYLQSGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDGSKPLER.................................................................. 184
2 -5.900IDP04288 gene: YPCD1.08c; hypothetical protein YPCD1.08c [Yersinia pestis CO92] YPCD1.08c [Yersinia pestis CO92]  ali follow..  10  3...........................................................................KLSELADEDIYNIASYTIRHFGVTQAKLYHENLAKVFELL--------AKNPE-----LGAECNWICSDIRRFQYKKHGIYYITLSNDILISRVLHQSIDIDVQD 94
3 -5.700IDP04229 gene: purN; phosphoribosylglycinamide formyltransferase [Clostridium perfringens ATCC 13124] CPF_0676 [Clostridium perfringens ATCC 13124]  ali follow..  2.................YKIAVLASGSGSNLQSILDN---NGNINGEVSLVIGSKEGIFALERAEKQGIKTSVVSKKEFEDKTSDEILRLAKENNIDLIVLAGYLSILKGKLLEEYGN--RIINIHPSLIPSFCGNKMYGINVHKAAIEKGVKFSGCTVHDGGAIIAQEIVEVNFEDT.. 165
4 -5.490IDP93869 alpha-ribazole-5`-phosphate phosphatase [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001006898 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  12  1...................MRLFLVRHGTEANLRGVFCGLTDLALTPIASWLADVAFADGVSSQLLRARHTADIVLAGHPLNAGINDQLNEMNGEWEMRHHHDLQREDPDAWAAWVTDWQQASPTGGESFIQFSDRVESVVQSLLSTNSHQTNRHQTNNHDNNQLLVAH........... 160
5 -5.470IDP04119 adenylate kinase [Bacillus anthracis str. Sterne] BAS0131 [Bacillus anthracis str. Sterne]  ali follow..  10  14...........................GTQAEQIVAKYNIPHISTGDMFRAAMKAETE-SFIDKGALVPDEVTIGIVRERLSQEDCVRGFLLDGFPRTVAQASALEEIMKDLGKKIDYVLNINVDSGLLLKRLTGR............................................ 127
6 -5.450IDP05129 gene: adk; adenylate kinase [Clostridium difficile 630] CD0091 [Peptoclostridium difficile 630]  ali follow..  15  19...........................GTQAVGIVEKYNIPHISTGDIFRKNIKEGTE-EYMDQGLLVPDELTVGLVTDRISQEDCKNGFMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSILVSRAVGR............................................ 132
7 -5.350IDP92034 adenylate kinase, putative [Toxoplasma gondii ME49] TGME49_024900 [Toxoplasma gondii ME49]  ali follow..  18  43..............GAP---------KGTQSVKLKKSHCLCHLSTGDMLRHAVATGTE-AKLDAGELVSDEIVLGLIDEKLKTPECRRGFILDGFPRNEAQAAGLDNLLKQKNQKLDGVLYFDVPDNILVERVSGR............................................ 163
8 -5.010IDP06477 gene: A13L; A13L [Monkeypox virus Zaire-96-I-16] NP_536550 [Monkeypox virus Zaire-96-I-16]  ali follow..  18  11............................SSYDDYIETVNKITPQLKNLLAQIGGDAAVKGGNNNLNSQTDVT---------AGACDTKSKSSKCITCKPKSKSSSSTSTSKSSKNTSGAPRRRTTATTSFNAMDGQI-------VQAVTNAGKIVYGTVRD-GQLEVR--GMVGEINHDL 143
9 -4.850IDP01657 gene: dapX; lipoprotein [Yersinia pestis CO92] YPO3061 [Yersinia pestis CO92]  ali follow..  14  231......VQSGSDDTGLPLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVLSSSSWDALGAKDPELPEGDYK-----QVGDLDNRSSLQFIGPKGHTLTQAQNDALVAVFQAAFSQTSATAI........................................................ 351
10 -4.830IDP04342 gene: panD; aspartate alpha-decarboxylase [Bacillus anthracis str. `Ames Ancestor`] GBAA1564 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  3......RTMMRAKLHRATVTEANLNYVGS--EDLMDAVNIVENEKVQIVNNNNGARLE-TYVIKGERGSGVVCLNGAAARLVQPGDKVIIICYGLVAEENIHKQEPKIA....................................................................... 106

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.