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Query: gi|29345419|ref|NP_808922.1|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AATLFTSGKPVEELSENAAVGRKSVITAAGATLPLPFYSEAFKMYWEKNDIPVTYAGIGTERGFRSLKNQQIDFAGVDVPPTKAELDSLPVKSILVPTCMGAVTIAYNLEGVDNLRLTGELIADIYMGKILKWNDARIAAVNAGKQLPDKEIYPVFRLDGSGTTYIFSDYLTKVSTDWKAKIGTGKALTFPRGVAATGNTGVAGLVGKVPGAIGYVASEYAASFNTQSAWLKNAAGNFVQPTSESVTAVASVGDATGMITDSEVADAYPISCFTWVVLYKEQNYAGRSRSEAEETVKLLEWLISPEAQTITTQVQCSPLPEKAVEYAKNMLKEVTYDGKALRKLast
1 -5.360sp|Q8TE56|ATS17_HUMAN(removed signalp:1-27) A disintegrin and metalloproteinase with thrombospondin motifs 17 OS=Homo sapiens GN=ADAMTS17 PE=2 SV=2  ali   10  42.................................................................................PAAPRARPGERALLLHLPAFGRDLYLQLRRDLRFLSRGFEVEEFYSGRVLGHPGSLVSLSA-GLIQLGQEQVLIQPLNNSQGPFSGREHLIRRKWSLTPSPSKVLTEKKKPTWGRPSRDWRERRNAIRLTSEHTVETLVVADADMVQYHGAEAAQRFILTVMNMVYNMFQHQSLGIKIN---------IQVTKLVLLRQRPAKLSIGHHGERSLESFCHWQNEEYGGARYLGNNQVP......................... 300
2 -5.260sp|Q6UY13|YB003_HUMAN(removed signalp:1-19) Putative uncharacterized protein UNQ5830/PRO19650/PRO19816 OS=Homo sapiens GN=UNQ5830/PRO19650/PRO19816 PE=4 SV=1  ali follow..  14  7................................................................................................................................SLSSWKHDQDWANVSNMTFSNGKLRV------KGIYYRNAD.............................................................................................................................................................................. 41
3 -5.000sp|Q9NP50|FA60A_HUMAN Protein FAM60A OS=Homo sapiens GN=FAM60A PE=1 SV=1  ali follow..  11  8..........................................KMYRSIEGCCI--RAKSSSSRFTDSKRYEKDFQSC--GLHETRSGDICNACV----------------------LLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPASNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW.................................................................... 221
4 -4.980sp|O94875|SRBS2_HUMAN Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens GN=SORBS2 PE=1 SV=3  ali   13  3..........................................................GEHHGRVGIF--PISYVEKLTPPEKAQPARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQAL----------YNYTPRNE---DELELRESDVI-----DVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL................................................................... 200
5 -4.910sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   13  168........................................................................DCMDCDVPL--------------AELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGW-EPFIEQAASRLHPPRLKLEAKAKPRDINITSVLIDQYVSTKESWMAD.................................................................................................................................................................. 272
6 -4.840sp|Q8N9R0|CP081_HUMAN Putative uncharacterized protein C16orf81 OS=Homo sapiens GN=C16orf81 PE=5 SV=2  ali follow..  8............................................LQIAPNQEGMVQAGGQGHGLARVVLRAV---APHSPCGSPAATEAGRLMRRLPSVGGRMTA----PKTPRFLTRRPPASSPEDPPLPHPKTPRFLTQRPPASLPRRPRFLTVSSHSSGDLRLWTAH............................................................................................................................................................................. 135
7 -4.800sp|Q8N398|VW5B2_HUMAN von Willebrand factor A domain-containing protein 5B2 OS=Homo sapiens GN=VWA5B2 PE=1 SV=2  ali   16  9.........................LLTAASPMAATTHRTLELMRWHRGTARCFSFGLGPTQGLSALSRGQAYFLRPGQRLQPMLVQALRK--ALEPALSD-ISVDWFVPDTVEALLTPREIPALYPGD...................................................................................................................................................................................................................... 114
8 -4.800sp|Q9Y5S1|TRPV2_HUMAN Transient receptor potential cation channel subfamily V member 2 OS=Homo sapiens GN=TRPV2 PE=1 SV=1  ali   10  2......................................................................KFTIGMGELAFQEQLHFRGMVLLLLLAYVLLTYILLLNM-----IALMSETVNSVATDSWSIWK................................................................................................................................................................................................................. 61
9 -4.760sp|Q86XX4|FRAS1_HUMAN(removed signalp:1-26) Extracellular matrix protein FRAS1 OS=Homo sapiens GN=FRAS1 PE=2 SV=1  ali   10  34.....................LHGQLLQTLQSPATPIYQFQLDELSRG---LLHYAHDGSDSTSDVA-----VLQANDGHSFHNIL----------------FQVKTVPQNDRGLQLVANSMVWVPEGGMLQITNRILQAEAPGASAEEIIYKITQDYPQFGE-------VVLLVNMPADSPADEGQHLPDGRTATPTSTFTQQDINE--GIVWYRHSGAPAQSDSFRFEVSSASNAQTRLESHMFNIAILPQTPEAPKVSLEASLHMTARE-LTVIQPHSLSFINSEKPSGKIVYNITLPLHPNQGIIEHRDHPHSPI........................ 299
10 -4.680sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   13  18........................................................................DCMDCDVPL--------------AELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGW-EPFIEQAASRLHPPRLKLEAKAKPRDINITSVLIDQYVSTKESWMAD.................................................................................................................................................................. 122

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.