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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -9.600sp|Q5SXM2|SNPC4_HUMAN snRNA-activating protein complex subunit 4 OS=Homo sapiens GN=SNAPC4 PE=1 SV=1  ali   26  214..............................................................................................................................................................................................................................................................PEKGALDLGLLSQEGEAATQ----------------QW----LGGQ-----GVRVSRLPYQ--PPALCSLRALSGLLLH-----KKALEHKATSLVVGGEAE. 288
2 -9.430sp|O75157|T22D2_HUMAN TSC22 domain family protein 2 OS=Homo sapiens GN=TSC22D2 PE=1 SV=3  ali   27  85.....................................................................................................................................................................................................................................................................................AIDNKIEQAMDLVK---SHLMYAVREE----VEVL-QIKE------LVERNSLLERENALLKSLSSNDQLSQLPTQQANP 152
3 -9.060sp|Q15714|T22D1_HUMAN TSC22 domain family protein 1 OS=Homo sapiens GN=TSC22D1 PE=1 SV=2  ali   23  225.................................................................................................................................................................................................................................................................................ASVVAIDNKIEQAMDLVK---SHLMYAVREEVEVLKEQIKELIE-----KNSQLE---QE-NNLLKTLASPEQLAQFQAQLQTG 296
4 -9.030sp|Q9UPA5|BSN_HUMAN Protein bassoon OS=Homo sapiens GN=BSN PE=1 SV=4  ali   24  9......................................................................................................................................................................................................................................................TAEESAK--ERFSLYQHQGGLGSQVSALPPNSLVRKVKRTLPSPPPEEAHLPLAGQASPQLYAASLLQRGLTGPTTVPATKASLLRELDRLRKKQAEEEEKEIDAK..... 125
5 -8.880sp|Q15714|T22D1_HUMAN TSC22 domain family protein 1 OS=Homo sapiens GN=TSC22D1 PE=1 SV=2  ali   23  79.....................................................................................................................................................................................................................................................................................AIDNKIEQAMDLVK---SHLMYAVREEVEVLKEQIKELIEKN---------SQLEQENNLLKTLASPEQLAQFQAQLQTG 146
6 -8.760sp|P35573|GDE_HUMAN Glycogen debranching enzyme OS=Homo sapiens GN=AGL PE=1 SV=3  ali   12  93.................................................................................................................................................................................GSVIIFRVSLDPHAQVAVGILRNHLTQFSPHFKSGSLAVDNADPILKIPFASLASRLTLAELNQILYRCESEEKEDGGGCYDYAGLQGLMSVLAEIRPKNDLGHPFCNNLRSGDWMIDYVSNRLLQAMFFYLKQIPRYLIPCYFDAILILDTAWKQMSSFVQNGST-KHLSLGSVQLC.. 298
7 -8.730sp|Q5JUK2|SOLH1_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 OS=Homo sapiens GN=SOHLH1 PE=1 SV=4  ali follow..  17  51..............................................................................................................................................................................................................................................PSSCLRRNVISERERRKRMSLSCERL-----RALLPQFDGRREDMAS---VLEMSVQFL--RLASAL------GPAILASSK-EMWHSLQEDVLQLTLSSQIQAGVPDPGTGASSGT.. 155
8 -8.660sp|Q2M1Z3|RHG31_HUMAN Rho GTPase-activating protein 31 OS=Homo sapiens GN=ARHGAP31 PE=1 SV=2  ali   18  1...........................................................................................................................................................................................................................................................................RHLAHIASFSSKTNMHARNLALV-WAPNLLRSK--EIEATGCNGDAAFLA-VRVQQVV-IEFILNHVDQIFNNGAPGSLENDENRPIM.. 83
9 -8.560sp|Q13459|MYO9B_HUMAN Myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=2  ali   22  1............................................................................................................................................................................................................................................................................QEQLAAIYAVLEHLPEANHNSLERLIFHLPGALAIIFA------PCLLRCPDNSDPLTVEMLIKEQMRKYKVKMEERRLSLLRQNAP.. 117
10 -8.560sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens GN=SKT PE=1 SV=2  ali   24  1..........................................................................................................................................................................................................................................................................VEDGAFLLRQVG--ATLKGEFPTLQ---NKMRAILRIE----VEAVRFLKEPH------KLDSLLKRVRSMLRRHVTDGLLKGTDAAQAA. 85
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.