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Query: gi|29345417|ref|NP_808920.1| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIPVDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGITLast
1 -5.380PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  15  2................................................HNFKEKIFSKIRSRSCPFMQQNKFRKAIVAILMPMIFGKFAIKTLVMYFPFSILYFVGFFFDLILFNLI............. 101
2 -5.180HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;  ali follow..  15  105.........................................AFGIFDNQSIEKSLLVRILALLDRRLGKRRLLALEESME-DWVRAFYVIRMQAEGLME............................... 169
3 -4.230PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  14  15...................PYEFAVC-----APRTDCPKREQCLRASAGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELQSLKHRLLTYFGKTTYYRIYR---YIRDSFVRAGFS 135
4 -3.720HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  10  1......MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVI............................... 93
5 -3.580PB008434 gi|121582878|ref|YP_973320.1| hypothetical protein Pnap_4296 [Polaromonas naphthalenivorans CJ2]gi|120596140|gb|ABM39578.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]  ali follow..  16  161...................PFFNVVCTGNAAMPVGDNAAIPHMWVDATHPNFKEKDRLVKGVCPIDFWKAMTEKPLPVFPEGRLV---DLPLTVADLLAPDLNQ--------------KLGNIDRAAG.. 263
6 -3.320PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  19  4..............................IQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLK...................................................... 49
7 -3.130HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  19  1..........................................MTPYVSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLI.............................................. 43
8 -2.970PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  19  37.....SLTMTAGLILSLLGPAYLVFFAD-AIFGVLWFVEPLTYFPILGSAAMYQAFMIGNISNPAAIVAQSSIGAKAGSKRGDLAAVMAIGGAATMHLLSLL............................ 151
9 -2.880PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)  ali follow..  3......LDGFEAVGEKTTTNKMTMTVMESSVRFSKGVTEALGCPAYVKLLVNDK---KKIAVQACDAXDENAIKFCKTVDSDAAGKASSVTVRTTDVLVAVQKYFTFPPVADDQIAYFAM.......... 121
10 -2.610PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  18  20....................YDYMIIEGDTIPREFIDLEEVIILNKIKFTSDLILRRKTRKVWPYAKLASETKIVQKYIEEQFAAELKKLTRTEGQILVKLIHR-------QTGVTTFQLIKNLR..... 144

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.