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Query: gi|29345422|ref|NP_808925.1|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DEMFDRETTEVLPSVISEDRTLYTDTEYLISKPVFVTNGATLTIQRGALLKALPASGQGKATIVITKGCKIVANGTEDAPIVMTALIKEPGSWDGVIVLGKAPVSYECETLYCGTVATDISYGGSEENDDSGSLQFVRVEYAGAAGGAVTFDGVSRGTTIDHCQSYCSGGDGFMFNGGTVNAQYLISTGASQNGLCFNEGYTGKLQYVMATAPIRKSVWSVVSCNGTGKLEVPSFYTHPVIANLSTAHDNKSHGRRYPIAVSAYSRLTLVNSSTREAVADDDIPVQLIGGQPGALPGIDYILINATREVTSLTPDRFVLDTFFERTDYEGAVAPDVMKDRDWTKAGWVRQGKKPLast
1 -4.060PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  11  206.............SIFALTITFAYNSTFLLAQIVRIN-----TIRPNPNPNPNEIFNFDLNNLPIENG-------LTVEAIWFLQSKMELTDTATVIIINNTAY---------------VNINKNSVKHNNFAVNYLKSEENNWYLTGRDFPLLG-------LFVEKFFKDDVEVFSPKIPALYFVVNNSTKNTFTFDNGFS........................................................................................................................................................ 381
2 -2.930HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali follow..  36...................................LHAGELVSPYKNLYADRTLWNTMTREQQSLQV---IRALSAIHPQWVFAGLS-------AACVYGLQHNYSLHDGTVHIAS------KSGIGGGDEARLNRIYINRIPRKHNGILLTTPAR-TLLDFPQALPIYDSALR---SLTTIEEVQSL--------MIQSVCDEVSVTKLLKYANPLSENGGES.................................................................................................................................. 203
3 -2.730PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  40.......SEIELGGNIEYSGN-WGNRSNKKFPVFKYTHGRSLKITIDENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISG-------SSDVKFPHNVKLRLGEFSVSGSDCKNLTSKVSGSGD----ITLKGKADE....................................................................................................................................................................................... 203
4 -2.510PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali follow..  1.....................................................................................................................................MKRFASHFPAYGYLKQYAVETEEGSVVRIFPLTEEI-ENVEWLPGAI.............................................................................................................................................................................. 49
5 -2.490PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  11  388....................................TECNKIDIEDITLDVTGGGYAAAIGT-ITIKNSVITACSGKGAAAIYGGNGQTGPTIGSIVIENSTIYANLLPLNEYGANGAYGACIGLGVRLWIGKSACGEIRITTDNETSFMNNLIGYGDILWDPDRPNTTWCARSFSGVWINNT------RKDTGDDRGKGYSG....................................................................................................................................................... 580
6 -2.460HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  14  2...............IMNPNILNKNPLMFFDRAVNAQRSQLLTVMADAVSECRTAA---------DQAAELNETGQVG--AEVWSAIRAKEGMGGLILEGTEAKILSDVVAQF-----YAYLSGCMFNDPVGMAIYAELHYMMSSL................................................................................................................................................................................................................ 120
7 -2.410PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)  ali follow..  10  1.........................................................................................................................WSVREGELLDEAVDFCR--------RGLEFYAVNS-----------NMPEEEADMSALRSRKVSADMYIDDRNLGGLPDWGVIYEMV.................................................................................................................................................. 69
8 -2.290PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  12  117.............EDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDK-------ETPVVVQTKKPD-----GVLVVAQ---------------------GVDNVQIKKTIIEAVT-----------RVLDVPS----HRVAVAPKKMKE...................................................................................................................................................................................... 229
9 -2.280PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  14  30.....................LNSSAVKNAVTSVTGGKAVTFENLQGTWMYVNPALQLEGDNALKNVAGSLAATEAEKK-YVFNSDSTFTSALKRGSLKGTYSVSPEDKTVTLRYTVGNKKLTSTLTAHVVLSGNELTLLFNADKLLKFTVSSISSNTTLKAINKLASEYDGMML................................................................................................................................................................................... 201
10 -2.260PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  2.AITSAPPVTTPAPTAQSVAADAAMSRFE--GSLTMTAGLILSLLGPAYLVFFADLQITAGMVWVAFLAVAAIFGVLVEPLTYFPILGSAAMYQAF-MIGN--ISNKLVPAAIVAQSSIGAKAGSKRGDLAAVMAIGGAATMHLLS--LLIFVGFLGTWLVSLVPVEVIEVARLYMGAVL.............................................................................................................................................................................. 186

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 5 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.