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Query: gi|29345425|ref|NP_808928.1| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKSILIIEDDIVFSRTISNWLVKQGMKTQCVATIAEARRAIAGKPFSLILADMRLPDDNSLSLLEWMRERRCTVPVIIMTNYGEVENAVTAIKLGATDYLRKPVQPDILLELIVGIKEGDSGKPSFYRGESAKAQEMYRQIELIACADISVLLRGASGTGKEHVAHEIHERSHRWNKPYVPVDCGTVPEELAASEFFGHLKGAFTGAESDKAGLFRTADGGTLFLDEIGNLSYRTQVMLLRALQEKRYRPLGDTREYPFDIRLVAATNENLEKAIAEGRFREDLFHRLNEFTIRLPLLAECREDILPLADFFLEEANAELGKRTGGFDREARSRLAAYQWPGNMREMKNTVRGAVLLTPDGERIAAGSLAFSVREADGADASETLALNDAQKEKECIMRALEETGGNRKEAARLLGISRSTLYEKLRKYGFQLast
1 -3.340PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  10  27...ITMEDVDLATADALKRAAASMGILLALESHRLSYEYYALSQRRELWTHDVGLFEYDRRGLRYHHLSVSWKHHPPVVTA--ETTVLNQYLDGHELADPVPPEMDRQFLEAIKEVSARRMISTYYLMGEAESGKSWMNLSLKQLCAMKRHVFAGQNLYARGACYHSFDQGSFGRKPGFIAANAGLLTKDI-YLRSVHKHAPQKLILAAAGTPWYSAVSRKAIIIDGQEQLIIRMRDPLTNFEQTVVMTLDAPPKTTKLLIETSFQSETDCHIRVTDMGFGE...................................................................................................................................................... 313
2 -2.850PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  15  26..........................................................................................................................................NFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMI--------KAGANEGATGERAIIYNAPRVEAI----TGSLAIILADAMLGELTPAMAAAIAASPARKFGVEVIGVTPEPLPHLIEA........................................................................................................................................................... 159
3 -2.310PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  11  62......................................................................................................PEFLQRIIKAGSSPIQHDIMLLGALTALGACMSRHVRC-GKYHHPSLQCFVVAPSASGKGILSYI--------RLLVEPIHDEIRKEVTIQMKAYKKEKAEYDAMGKERTKIMDSDGTGLICEAEADTLSTAIGSDLRKAFDHDRLNRRTDQEYREVKLSVLISGTQTFIPTAEDGSYSRQLYYYMCGISKWISQFMDNEIDWEEIFTAMGLEWKETHGIHTLQLTDEQKEEIDTV--VANGREMYSFVARLAVNL.......................................................................... 366
4 -2.230HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  13  116......................................................................................................................................................................................................................YTQIAKYNTFLENITDCPME-EVKCLRAYFFLNLAFYYT------DVPMPLKTLSVDEANSISQTPQTEVYSQV--------------KDLKTAIDLLPVHYLRGIWRLPGG.......................................................................................................... 216
5 -2.150HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;  ali follow..  15  73................................................LFADS-LPDTFGNQIINE-WFASKGLSGEEITPLDRL-CYVGKRGMGALEFEPSVLHIEELTELAKSVFTDRMAFQVQLRQEGRNILDILK..................................................................................................................................................................................................................................................................................................... 170
6 -2.050PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  4...........................................................................................................................................................DKGGPEAHFKRYI-KEHVKGKKTGLFITLGADPAGEHGESMLKVGRELLNEGGNEILAEFICQ----------GAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHPDENDLKNARKAFEG..................................................................................................................................................... 120
7 -1.560PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  30...............................................................FEKAKKEREQAVIARLIDIRKAQQEYRSLHHGMY-------HFDTLIDFVKNFVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKKNGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYG--NGAIFEMNVKNDTAKSGAPVYLFEVKAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGA........................................................................................................................................................................... 224
8 -1.350HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  12.........................................................................AALISFAACDHNETYADQRDREL-DSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQ-NDGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAASVKNTSGTFEGYFVDIKKSLLANTY-GTVSATVPSGWLIPFTWIKVGRLITADDELAHVRLLVPHTYGTTSASASVY---ACLYDIRF.............................................................................................................................................. 234
9 -1.300PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  11  7.........................................................................................................................................................................................................................EPGKGIVLKEYGK-NIQKIVDWILTIEDREQR----TRYANTCVELMRQLNPGVRDT---EEHTTKLWDHLFIMSVDTPPDIAVLGRKPERVPYNHNKLKKHYGKNINLLIEQAILKEDGAEKEDAIIYLGRLMKRL.............................................................................. 144
10 -1.290PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  15  26.......................................................................................................................................CLIEFIGRKTKNRRSIIV---QKLGKKELIRQLDIAEANHCLSFEQVSDEII-------EYFNIQEGDFHTVESCKYNVPSVQAIGKVY------------HRLIISIISEQDNLVDV---------LFEVFNSFISDEISD--FNSSVYYS................................................................................................................................................. 144

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.