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Query: gi|29345426|ref|NP_808929.1| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKILKDTVLFGLFASYADGVRNGEEKLSAAYDDFATLLATLPTDGTNICAQLRRLFYTKIELRGIQETVSTNGMERHVLFDVYIGKALALLDAEEQMMKEVLRHGGTEAMGLKEEAVCRNGKKGSVTLTWNGTDSDLIELVAALMAAGVIGTAEGRELKVVDVIRVFEEVFHLKINALYTKRGKVFDRCTDTTPFIDSLRRSYNRMLDARLALast
1 -5.230HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  31....................................................................................................................................QPDRMENILYDYHLSISMGNNLSYSDNYQKEANYVFEKHHITEAEFDSSMVWYTRHTEELASLYKKLGERFRSEKKHMQE 112
2 -4.140PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)  ali follow..  245..................................................................................................................................SDNVYTTFDLDWAV-------DSDGNPKHLDHA-----------------DFIRIQSGVLQQCGWTGETSTEVGRITN.... 298
3 -3.870HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  12  10.............................................................................................................................................................................RMKEEDNILKKVGKKNSFKVPYFENLTSEVMGKLPEKEG 50
4 -3.720PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  133...................................................................................................................................SRVVTPDDLDNA---GNVLFKLNDADKDEEKSLRAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLDGNGNPLSVRKT 210
5 -3.200PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  27  78........................................................................................................................................LSELNARL---ASIKSKSERRKYTKIVQKYIEEQFAAELKKLTQILVKLIHRQTGVTTFIKNLRSGWRAFWYDTTA 156
6 -3.200PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  15.............................................................................................................................................YQVLASSAITYEE---LRLHAIEGLLKYYGN---HLADHAFAYLAATDGSYFAIYEALAAWWEAR...... 77
7 -3.080PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  139............................SMWCDYLRMLKKLQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAE------QRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERIIDLVNKNANL... 315
8 -2.860PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  265..................................................................................................................................................................MTETLARVY--NFSKAKQAYRILSLKYPEKSGFFADQIRAIEKLQEN... 313
9 -2.850PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  10  151...................................................................................................................................ASGSSFEDIDMAV---HTIWKESPSDEEMRHAGKVMTELDGTELFTRITERLTDEAMSERLAKAMAVFVDTVNMTVTQQKE 228
10 -2.780PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)  ali follow..  1.................................................................................................................................WSVREGELLDEAVDFCRKRGLE-----------------YAVNSNMPEEEADMSALRSRKVSADMYIDDRNGVIYEMVHNRWS 74

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 6 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.