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Query: gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEWGVRFYVLSKQEWKQQTIDRCGQFYCLVPSNAGFHVYLFVTMDTGENAVFVFPPHFFIRYRERYWGKHSTLSGKILRKTYLKDNLVMRYGLQPGSEERVTGARIYSASSHGVALGIVLNDEAYLFKTFITYAMTKGEQIPLYMQEKLSMERAQVEYYNTGRLADLVELEERDRKRREMLMAEERRREEKEKRRAAEPGEAYFYVEGPLTLIMPDEEIQEENTGFWQRGTTMFCDSKLIEESQREMRELASVEARIQELKNIPQKAEEKKGVFKRLFGRYFLast
1 -6.790sp|Q86WV6|TM173_HUMAN Transmembrane protein 173 OS=Homo sapiens GN=TMEM173 PE=1 SV=1  ali   22  51.........................................................................................................................................................................................................AWSYYIGYLRLILPEARIRTYNQHYNNLLRGAVSQR-LLPLDCGVPDNLSMADPNIRFLDKLPQQTGDHAGIKDRVY.... 131
2 -5.970sp|Q502W7|CCD38_HUMAN Coiled-coil domain-containing protein 38 OS=Homo sapiens GN=CCDC38 PE=2 SV=1  ali   17  2............................................................................................................................................................................................EFLLDDEMDVDLEPALYFKEPEELLQVLRELEEQNLTLFQYSQDV---DENLEEVNKREKNIEFLLEQEKMLKANCVREEEKAAELQLKS.... 96
3 -5.970sp|Q8N9Y4|F181A_HUMAN Protein FAM181A OS=Homo sapiens GN=FAM181A PE=2 SV=3  ali   19  15...........................................................................................................................................................................................................FQYHGQPIYALPQSPV--PSLGLWRKSPAFPGE---LAHLCKDVDGLGQKVCRPVVLKPIPTKPAVPPPIFN-VFGYL. 91
4 -5.870sp|Q5SZB4|CI050_HUMAN Uncharacterized protein C9orf50 OS=Homo sapiens GN=C9orf50 PE=2 SV=1  ali   22  2................................................................................................................................................................................................................PFRVRFADETLQDTTLRYWERRRSVVIVNQKAALPVASERVFGSVGKRLESLPKAPGAKEE............. 67
5 -5.600sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2  ali   22  91.................................................................................................................................................................................................................LSGPSSDSEIVQELTCFLHRLASMHKDYAVVEILSKVLDKHSAQLLLGCELRDLVTECEKYAQLYSNL..... 165
6 -5.560sp|Q14999|CUL7_HUMAN Cullin-7 OS=Homo sapiens GN=CUL7 PE=1 SV=2  ali   20  88...............................................................................................................................................................................................................ACLRSPNTDREVLQELIFFLHRLTSVSRDYAVVDAISKALEKHLGKLELAQELRDMVFKCEKHAHLYRKL..... 164
7 -5.060sp|Q494V2|CCD37_HUMAN Coiled-coil domain-containing protein 37 OS=Homo sapiens GN=CCDC37 PE=1 SV=1  ali   17  1............................................................................................................................................................................................................YFTEPQQLLDVFRELEEQNLSLIQNSQET---EKTLEELSHTLKEVNQLKQWVTTMMMSITKEEDTAAELELKA.... 79
8 -4.850sp|A6QL63|BTBDB_HUMAN Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 OS=Homo sapiens GN=BTBD11 PE=2 SV=3  ali   16  11........................................................................................................................................................................................................................DSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRL------LPDLDEVPWTLQELEALLLR...... 64
9 -4.760sp|P08F94|PKHD1_HUMAN Fibrocystin OS=Homo sapiens GN=PKHD1 PE=1 SV=1  ali   15  2..................................................................................................................................................................................................................DIASGNERIIVEDAVDWRPHDKIVLSSSSYEPHEAEVLTVKEVKGHHVRIYE.................... 53
10 -4.730sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2  ali   11  2..................................................................................................................................................................................................................TAFAGSKVLSLMDAVDWQEGEEIVITTTSYDFHQTETRSIVKILHDHKILILNDSLSYTHFAEKYHV..... 68
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.