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current user: public |
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Query: gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . | |||||||
# | Score | Template | Links and tools | %id | First | MVSTSTHDDAFDFDFGYTGKLQFLVATVDANSTYYTKDPNGIECDNDGSSSSLTPFTHPTISNLTIVGTVNGKVAQSAMGDGKSMKSCANFRRNCQFTLVNSILYGYPTGILCETTNSYVFKNNVVNGVSTTFSGITADATNTAAASAEAIGLTSPWGGYTGLMPNASPANAGADFSELDSWFTTTSYRGAVGGRSNWLTQAWVK | Last |
1 | -7.070 | 1nkw_S mol:protein length:115 50S ribosomal protein L24 | ali model follow.. | 11 | 18 | ......KGDTVIVHKGQTGKVLLALPRDQK-VEGVNVITKNVKPSMTNPQGGQEQRELALASKVALVDPETGKATRVRKQIVDGKKVRVAVASGK.............................................................................................................. | 112 |
2 | -6.760 | 3j7z_U mol:protein length:104 50S ribosomal protein L24 | ali model follow.. | 13 | 7 | ......RDDEVIVDKGKRGKVKNVLSSGKV-EGINLVKKHQKPVPALNQPGGIVEKEAAIVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE.............................................................................................................. | 101 |
3 | -6.760 | 3aq3_A mol:protein length:211 6b protein | ali model follow.. | 9 | 134 | FLAILMSQLFIRIRTDVIRGQGYGWYARLGNYVEEGEDNEGIENEEEEEEEEEETRE-SDLIHYPIVALGS...................................................................................................................................... | 206 |
4 | -6.690 | 3j3v_U mol:protein length:103 50S ribosomal protein L24 | ali model follow.. | 12 | 5 | ......KGDKVMVDKGKQGTILAAFPKKDR-VEGVNMVKKHSKPTQANPQGGISNQEAPIVSNVMPLDPKTGEVTRVGYKVEDGKKVRVAKKSGQ.............................................................................................................. | 99 |
5 | -6.610 | 4wce_R mol:protein length:105 50S ribosomal protein L24 | ali model follow.. | 10 | 6 | .......GDNVKVDKGKEGKVIATLPKKDR-VEGVNIMKKHQKPTQLNPEGGILETEAAIVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIKSNN........................................................................................................ | 105 |
6 | -6.220 | 4v4i_S mol:protein length:110 50S ribosomal protein L24 | ali model follow.. | 13 | 10 | .......GDTVLVYKGRVGKVKEVLPKKYA-VEGVNIVKKAVRVSPKYPQGGFIEKEAPLASKVRPICPACGKPTRVRKKFLENGKK-IRVCAKCGGAL.......................................................................................................... | 106 |
7 | -6.190 | 4nk6_A mol:protein length:491 Poly(beta-D-mannuronate) C5 epimerase | ali model follow.. | 8 | 248 | FYCYETRDFVVK-GNTYRDNIVYGIDPHDRSHGLIIAENDVYGTKKKHGIIISREVDNSFIFRNKSLDRNSVGNIVAYNEIYQNHTDGITLYESGNNLLWNRVIANRRHGIRVRNSVNIKLYENVAMA............................................................................. | 384 |
8 | -6.150 | 2w0c_P mol:protein length:104 PROTEIN P3 | ali model follow.. | 11 | 17 | ....GNVSTGLDALISGWARVEQIKAAKASTGQGRVEQAMTPELDNGAAVVVEAPKKAAQPSETLVFGVPQKT.................................................................................................................................... | 85 |
9 | -5.800 | 5mlc_W mol:protein length:191 50S ribosomal protein L24, chloroplastic | ali model follow.. | 6 | 72 | .......GDTVKVEKGKIGEISKIHKHNST-IKDLNFKTKHVKSKEEGEQGQIIKIEAAISSNVMLILKEQEVADRVGHKILEDVRK-VRYLIKTGEIV.......................................................................................................... | 168 |
10 | -5.790 | 4o4a_A mol:protein length:170 Lipoprotein, putative | ali model follow.. | 16 | 21 | .....TTDTIYLIPEEYEGDLIVVYNVPGAELLPKEEEFSVVTFAADGTAVTSTKNMKFGTVNDLYY------------------------KEGQRTKIDSSCIHFSSTGSRTENSWEFPFAN.................................................................................. | 117 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |