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Query: gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDIIANIASILGFTMQMNDKFFAHGMNKEQADNEMLLLFLKQLSVKSKAIKEIHQKYHSLSNDFRLVAVFLTNPVIYEKIVTNRSRALRNALKESLQTPSARIAQTQLSAQLRPCFENLLVSIKDESHLSVEFSGINDCEMKAILRKILNAQKEIFQLHQQFCGIMKTIGSYPLGNWGDSEFDFIKTNQRVFISDFYSIIDYADIILMGYLDIYHCALNLKLast
1 -7.1001zw9_A mol:protein length:240 HSP82  ali model follow..  21  31...............................................................SLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSG-------GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVG--------------------FYSLFLVADRVQV............. 150
2 -7.1004x9l_A mol:protein length:250 Heat shock protein  ali model follow..  21  47...............................................................SLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSG-------GMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG--------------------FYSAYLVAERVVV............. 166
3 -7.0802ye2_A mol:protein length:252 HEAT SHOCK PROTEIN HSP 90-ALPHA  ali model follow..  21  37...............................................................SLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG-------GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG--------------------FYSAYLVAEKVTV............. 156
4 -7.0201a4h_A mol:protein length:230 HEAT SHOCK PROTEIN 90  ali model follow..  21  21...............................................................SLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSG-------GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVG--------------------FYSLFLVADRVQV............. 140
5 -7.0001yc1_A mol:protein length:264 Heat shock protein HSP 90-alpha  ali model follow..  20  53...............................................................SLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG-------GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG--------------------FYSAYLVAEKVTV............. 172
6 -7.0003k97_A mol:protein length:251 Heat shock protein HSP 90-alpha  ali model follow..  21  40...............................................................SLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG-------GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG--------------------FYSAYLVAEKVTV............. 159
7 -6.9803k60_A mol:protein length:223 Heat shock protein 86  ali model follow..  20  17...............................................................SLIINTFYSNKEIFLRELISNASDALDKIRYESITDTQKLSAEPEFFIRIIPDKTNNTLTIEDSG-------GMTKNDLINNLGTIARSGTKAFMEAIQASGDISMIGQFGVG--------------------FYSAYLVADHVVV............. 136
8 -6.9402xab_A mol:protein length:249 HEAT SHOCK PROTEIN HSP 90-ALPHA,  ali model follow..  21  38...............................................................SLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG-------GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG--------------------FYSAYLVAEKVTV............. 157
9 -6.8703ltq_A mol:protein length:171 Interleukin-1 beta  ali model follow..  13  1........................................MAPVRSLNCTLRDSQQKSLVMSGPYELKALHLQGQDMEQQVVFSMSFVQGEESNGYIDTNNDGWIEGDELYDKIPVALGLLSCVLKDDKPTLQLESVDPKNYPK------KKMEKRFVFNKIEINNKLEFESAQFPNW------YISTSQA............................... 145
10 -6.8602fwy_A mol:protein length:256 Heat shock protein HSP 90-alpha  ali model follow..  22  50....................................................................TFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG-------GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG--------------------FYSAYLVAEKVTV............. 164
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.