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Query: gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEWGVRFYVLSKQEWKQQTIDRCGQFYCLVPSNAGFHVYLFVTMDTGENAVFVFPPHFFIRYRERYWGKHSTLSGKILRKTYLKDNLVMRYGLQPGSEERVTGARIYSASSHGVALGIVLNDEAYLFKTFITYAMTKGEQIPLYMQEKLSMERAQVEYYNTGRLADLVELEERDRKRREMLMAEERRREEKEKRRAAEPGEAYFYVEGPLTLIMPDEEIQEENTGFWQRGTTMFCDSKLIEESQREMRELASVEARIQELKNIPQKAEEKKGVFKRLFGRYFLast
1 -8.8201mv3_A mol:protein length:213 Myc box dependent interacting protein 1  ali model follow..  26  152...................................................................................................................................................................................................TATDTDELQLKAGDVVLVIPFQNPEEQDEG-WLMGV--------KESDWNQHKKL-----------------EKCRGVFPENF.... 208
2 -8.7905xjc_x mol:protein length:703 Protein CASC3  ali model follow..  12  116...................................................................................................................................KSEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFF--------EHDLRGQTQEEGRWEHD--KFREDEQAPKSRQELIALYGYDIR----AHNPDDIKPRR........... 257
3 -7.7905mlc_T mol:protein length:256 50S ribosomal protein L21, chloroplastic  ali model follow..  19  113...............................................................................................................................................................................................KKGPPPPREEIFAVVVSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKTPIVTNAAVHAVVEE-KVIVFKYKKKKN-YRRNIGH.. 212
4 -7.7705jqy_A mol:protein length:429 Aspartyl/asparaginyl beta-hydroxylase  ali model follow..  14  306...........................................................................................................................................................................RRNENACKGAPKTCTLLEKFPETTGCRRGQIKYSIMHPLGLVIPKERCANETKT-WEEGKVLIFDDSFEHEVWQD-----ASSFRLIFIVDVPELTPQQRRSLPAI..... 429
5 -7.4704cfi_A mol:protein length:258 FLAGELLIN  ali model follow..  17  1..............................................................................................................................................................................................................DG-VSILQTASSGLTSLTNSLQRGPLSASDASAL---QQEVAQQIS------EVNRIASQTN.............. 62
6 -7.1103cz6_A mol:protein length:168 DNA-binding protein RAP1  ali model follow..  12  54................................................................................................................................................................ISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYF---LNMFKDNVNPPPNVPGIWTH------DESLKSNDQEQIRKLVRMEMRKRFFE---KDLLVPRG.......... 161
7 -7.0204by6_C mol:protein length:262 GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 5  ali model follow..  14  176.......................................................................................................................................................................................................LDTLFFIQGSYEQFLAARELFKNRN-CWEEESWRYFDYKKSWLARRCGNDFVYNEEDFEKL...................... 262
8 -6.9801b3t_A mol:protein length:147 PROTEIN (NUCLEAR PROTEIN EBNA1)  ali model follow..  21  5..............................................................................................................................................................................................FGKHRGQGGSNPKFIAEGLRALLARSHVERTTDEGTWVAGVFVYGGSKTSLYNLRRGTALAIPQCRLTPLSRLPPGPGPQPGPLRESIVCYF 102
9 -6.9802grx_C mol:protein length:229 Protein tonB  ali model follow..  17  141...............................................................................................................................................................................................SRNQPQYPARA---IEGQVKV-----KFDVTPDG----------NVQILSAKPANMFEREVKNA-MRRWRYEPGKPGSGIVVFK....... 215
10 -6.9205t03_A mol:protein length:692 maltose binding protein - heparan sulfate 6-O-sulfotransferase isoform 3 fusion protein  ali model follow..  21  465..........................................................................................................................................................................................VPVIMDKRQPPKRKRNFYYITDPVSRYL--SEWKHVQRG-WKRQVRMLADLSLVNESERNPILLASAKSNLKNMAGLTEFQRKTQYLFERTFHLRF 615
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.