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Query: gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVSTSTHDDAFDFDFGYTGKLQFLVATVDANSTYYTKDPNGIECDNDGSSSSLTPFTHPTISNLTIVGTVNGKVAQSAMGDGKSMKSCANFRRNCQFTLVNSILYGYPTGILCETTNSYVFKNNVVNGVSTTFSGITADATNTAAASAEAIGLTSPWGGYTGLMPNASPANAGADFSELDSWFTTTSYRGAVGGRSNWLTQAWVKLast
1 -6.510PF06093.13; SPT4_CANAL/6-85; Spt4/RpoE2 zinc finger  ali follow..  22  42.......................................................................................................................................................................................TSPSFEGLVEDNKGSWVARWLR 66
2 -6.350PF11344.8; K9TQG5_9CYAN/7-86; Protein of unknown function (DUF3146 topsan)  ali follow..  15  3...........................................................................................................................................................................TTAHVRVLNQSWQRGTLEGEVSAGDFSWSFRW.. 34
3 -5.870PF03673.13; Y1463_METJA/10-230; Uncharacterised protein family (UPF0128 topsan)  ali follow..  12  28.........GFDLIFG-DGKETYFTVELDERKAGDKFSKDGKEYE--IEVLQELPKNTELYAHIEM--------------------------EMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLSYEELPNVARRFIRSARKVEKETGFGRLSYYGETKDGEPRYRFSWL. 198
4 -5.770PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin  ali follow..  14  26..........................................................................................................................SGKSYCSDSPSVENCTAENKTEDCSAATTTRPSPTSSSVTTQTTPNATATPVTPSPRKSSFDAASFIGGI............. 95
5 -5.440PF02432.15; A0A090RH49_9VIBR/33-187; Fimbrial, major and minor subunit  ali follow..  11  3........................................................................................................................................................................................TLNFNGTIVDTNPDWA--Y.. 19
6 -5.390PF17692.1; G7PY63_MACFA/1-128; Family of unknown function (DUF5538 topsan)  ali follow..  11  1..........MGLKVGFQGG-KDALWLEGGVSARWARAPHSAPLRPPRELHAAPPSATPTQTVMRPAGPPTQRPPTGSGCVSGLWRKGLGLRPQTLLRVGGVVLSSAPA................................................................................................ 114
7 -5.380PF09493.10; K9PZ67_9CYAN/15-73; Tryptophan-rich protein (DUF2389 topsan)  ali follow..  10  49.................................................................................................................................................................................................KDKEMWEAGW.. 58
8 -5.340PF10109.9; I2BBZ9_SHIBC/6-107; Phage tail assembly chaperone proteins, E, or 41 or 14  ali follow..  1..........MTLKHGDDEMCHRVVTFRELTSKDVIDAQLAAERVVISDNGKAVAYCSEVLMGVELLRRQILQVGELPGPLSLKQLYAFHPED................................................................................................................ 90
9 -5.190PF07951.12; TETX_CLOTE/1105-1314; Clostridium neurotoxin, C-terminal receptor binding  ali follow..  9.FLRDFWGNPLRYDTEY-----YLI--------PVASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEIDSFVKSGDFIKLYVSYNNNEHIVGYPKDGNAFNNLDRILRVGYNAPGIPLYKKMEAVKLRDLKTYSVQLKLYDDKNASGTHNGQIGNDPNRDILIASNWYFNHLKDKILDWYEGWTN 210
10 -5.150PF13161.6; O51510_BORBU/20-177; Protein of unknown function (DUF3996 topsan)  ali follow..  12  20IINLIMSFPFIDFEIGYGG--------------------NGINLSGPKLESKFYDFNLLAIAALDFIGGNISISSHTSKLINVELGFGMRIPLVIFYDITENLEIGMKIAPSIEFISNTRSLAQ................................................................................. 139

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24