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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -7.870PF12126.8; I3MLB7_ICTTR/239-567; Protein of unknown function (DUF3583 topsan)  ali follow..  12  3.....................................................................................................................................................................................................................................................TMAHALQEQDSTFSTAHAEMRSAIGQLGRARADTEELISTHVRQVVAHVLARERELLDA----VNEQYQRDYQEMASQLRRLDAVLQRIQRMKRYASDQEVLDMVHKALNR. 119
2 -7.720PF12851.7; TET1_MOUSE/1528-1931; Oxygenase domain of the 2OGFeDO superfamily  ali follow..  19  3....................................................................................................................................................................................................................................SMYFNGCKFGRS------------ENPRKF------------RLAPNYPLHEKQLEKNL---------------QELATVL--APLYKQPVAYQNQVEYEEVAGDC-RLFCAHSHKDIHNMHNGS.... 103
3 -7.360PF09730.9; H3DKP7_TETNG/4-712; Microtubule-associated protein Bicaudal-D  ali follow..  19  574.......................................................................................................................................................................................................................................................DKDKEACMEEILKLKSLLSTKREQIATLRT-----LKANKQTAEVALANLKSKYENEKAMVTETMMKLKEDAAFSSLRAMDEYVMQLEEMQRQLTAAEDEKKTLNSL... 689
4 -7.180PF08347.11; H2RR76_TAKRU/1-251; N-terminal CTNNB1 binding  ali follow..  20  1.......................................................................................................................................................................................................................................................................................................................MPQLNGGGG-DDLGANDEMFKD-EKISENVSAERDLDDVKSSLVN. 50
5 -6.900PF12238.8; Q9BHA2_BABBO/74-309; Merozoite surface antigen 2c  ali follow..  18  1......................................................................................................................................................................................................................................................................KMDDQKVKDTFKNLYKVNALIKNNPMI-ATIVSGFSTKNDEEFNAIFDSIKGMYY-QHMDKYLKVEEDREKAVEYFKKHVYTGEHVVDVNGMA.. 108
6 -6.830PF16858.5; E9GRW6_DAPPU/321-617; Condensin II complex subunit CAP-H2 or CNDH2, C-term  ali follow..  169...............................................................................................................................................................................................................................................................FELVQQFMAEYTASAKEFVTSTESTRRVQ------AWH-DMIQPRLIHLYGSRI--IEEFGAAAPIGSQCAFTKIVHEVARYFLATANAYNVEIQLQDALT. 278
7 -6.630PF07246.11; Q88304_SFSV/4-294; Phlebovirus nonstructural protein NS-M  ali follow..  21  174.........................................................................................................................................................................................................................................................NQIAHHEIQQKENEIQKLRNDLRDAIKKGQEESMKLRVEESDARVKGLKEELKQTYKIFDHQATKDELQHAKSEMQSLRKKIKDFESI-PQAKKSSNLSLLGSSMA.. 290
8 -6.420PF15010.6; M4A0Y5_XIPMA/1-307; Putative cell signalling  ali follow..  19  1......................................................................................................................................................................................................................................................MLPKSRRALTIQE----IAALARSSL----HGISQVVKDHVPMAQGRVAHL----IEWKGWCKPIDTPAALESDFNSYSDLTEGEQEA-RFAAGVAEQAEAKLRAWSSVDG 105
9 -6.420PF12097.8; Q5NIP1_FRATT/1-374; Protein of unknown function (DUF3573 topsan)  ali follow..  20  4...........................................................................................................................................................................................................................................................................................KINIVFICFLV-------ITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEINHLTQIKNSNNS. 71
10 -6.400PF12938.7; B4L7C4_DROMO/671-895; M domain of GW182  ali follow..  10  99.....................................................................................................................................................................................................................................................................QHIRMLGQQIQLAIHSGISSQI--TQPLTQTTLNLL--QLLSSIKHLQAAQQSLSRGGNTNQMLAIAKYKQQIQNLQNQINAQQAVYIKQQNLQQ. 195

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.