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Query: gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEWGVRFYVLSKQEWKQQTIDRCGQFYCLVPSNAGFHVYLFVTMDTGENAVFVFPPHFFIRYRERYWGKHSTLSGKILRKTYLKDNLVMRYGLQPGSEERVTGARIYSASSHGVALGIVLNDEAYLFKTFITYAMTKGEQIPLYMQEKLSMERAQVEYYNTGRLADLVELEERDRKRREMLMAEERRREEKEKRRAAEPGEAYFYVEGPLTLIMPDEEIQEENTGFWQRGTTMFCDSKLIEESQREMRELASVEARIQELKNIPQKAEEKKGVFKRLFGRYFLast
1 -8.810PF15759.5; G5BQB5_HETGA/102-601; TMEM108 family  ali follow..  24  402.............................................................................................................................................................................................................ISVPLTVMRRKKTANPENNSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRSPANGDYRDTGMFETLF.... 491
2 -7.930PF04998.17; RPB1_CAEEL/824-1419; RNA polymerase Rpb1, domain 5  ali follow..  24  3.....................................................................................................................................................................................................TPSEFFFHMGGREGLI--DTAVKTAETGYIQR--------RLI----KAMESVVNYDGTVRNSLA---------QMVQLRYG... 63
3 -7.480PF12004.8; W5M8I3_LEPOC/710-1219; Domain of unknown function (DUF3498 topsan)  ali follow..  15  390.................................................................................................................................................QQEIAILQDKLRLSAKKLEDYESRLKGQEDQAQKMLLEYQARLEESEERLRRQQEDKELQMKGIISLMSVEEELKKDHS---EMQAVVDSKQKIIDAQEKRIASLDAANARLMSLTQLKER................ 509
4 -7.030PF15673.5; H0WQS8_OTOGA/89-366; Circadian-associated transcriptional repressor  ali follow..  19  6.....................................................................................................................................................................................SRDGELETSQNIQGCTTEGDLLFYIT-PLTDLL--------KMGRFERGLSSFQQSVAMDRIQR----IVGV------LQK-PYMGERYLGTLEGMLKTWF 101
5 -6.900PF02905.14; EBNA1_EBVA8/461-606; Epstein Barr virus nuclear antigen-1, DNA-binding domain  ali follow..  21  5..............................................................................................................................................................................................YGKHRGEGGSSQKFIAEGLRLLLARCHVERTTEDGNWVAGVFVYGGSKTSLYNLRRGIGLAIPQCRLTPLSRLPFGMAPQPGPLRESIVCYF 102
6 -6.760PF08347.11; H2RR76_TAKRU/1-251; N-terminal CTNNB1 binding  ali follow..  23  2......................................................................................................................................................................................................PQLN----GGGDDLGANDE-------------MISFKDE----EQEEKISENVSAERDLDDVKSLVNESESSSD.......... 57
7 -6.740PF03942.15; D4ZK60_SHEVD/32-218; DTW domain  ali follow..  20  104..............................................................................................................................................................................................................AKKPLFIMLD--------GSWREAIKMFRKSPYLHDAKYGLRKLGTAEVAVLALEASKGNAEALSIWFELFIA... 187
8 -6.160PF12881.7; F1MC09_BOVIN/121-829; NUT protein  ali follow..  27  384......................................................................................................................................................................................................PEAVREYVNGPIHLATSEAECGKDEDELKQEEDGTYADPDLIDKSQEELADLLSPEPQL-DPLALAEELEQEEGL-KRLLA... 495
9 -6.090PF15265.6; F6Y0I7_ORNAN/3-538; FAM196 family  ali follow..  18  415.................................................................................................................................................................................GRLQSVEESLHSNQEKIKVL------------LNVIQDLEKARALTEGFYRTGQDL-CST-IIYSVEYDFRQ----EGRFHQVEKQDIRRKSKK---KKCF.... 533
10 -6.040PF15676.5; F6YWC8_HORSE/2-552; Six6 opposite strand transcript 1 family  ali follow..  7  2....................................................................................................................................VEDIKENKATICKHETINTTDEEIGHYCKHSKEIKDNCSNWKPTCDVFHKHEDYMQDQFTIYQETVEKDKKMY-----------HGYICQYKDVLKQYQLKYSETPFSHEYYEKKREHEEIQNRVLACT---EQLKMNETIFMEF..... 133
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.