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Query: gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIQYNGITLLRDEDGTPMQVNIDLRVHGTELDAFMRAHGLTAQEQSEMLRSVTGEDISPTYVAGGKVQQHVRYLPEMKRQIQTETDRLFVSPRTRPVSVIRKEFPDLLLHRIVRVLTPIPRTKAATPKAFERYCGRDTFWVRFKMQGMMNVTWCVFFTIHDEGIVLVRHLAGAGENDEDLLast
1 -6.060PF08965.10; X2GUQ4_9GAMM/1-117; Domain of unknown function (DUF1870 topsan)  ali follow..  21  1.........................MTNLELQAYRRFLMLKVSEASEYIGKTDASTWH----EKGTVPVPQYVVTAMQELKKLRTDKV............................................................................................ 61
2 -6.000PF18760.1; N2IZY8_9PSED/2682-2810; ADP-Ribosyltransferase in polyvalent proteins  ali follow..  21  1...........DTKGSPL-----KLYHGTDVTMFDANRIGSETDAGWLGRGF--------YFSTEKKV................................................................................................................ 46
3 -5.880PF00406.22; KAD2_CAEEL/31-217; Adenylate kinase  ali follow..  16  10...........................GTQAPAFAQKYFSCHLATGDLLRAEVASGSE-ATMDAGKLVSDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGR............................................ 123
4 -5.830PF00086.18; E5S275_TRISP/152-222; Thyroglobulin type-1 repeat  ali follow..  16  6.............................................................................................................EEGLLASRHAGGSKVSIQAAFIPECLPDGSYQPIQCDIFSLTCWCV----DQDGIEKTGSRVTGGNRPN.. 70
5 -5.800PF14005.6; Q81R29_BACAN/60-193; YpjP-like protein  ali follow..  11  1...................................................LTTDTFITYAMQEAEKQSMQKFGTKIGPVIEDEFKDVILPKIEEAIAELANDVPEESLQSLAISQKPAGGNNEKIFHVYDTKTGNDL--LRFHVRRDHPPQDGYYFNFHYH.................. 109
6 -5.730PF16589.5; B3RX95_TRIAD/6-86; BRCT domain, a BRCA1 C-terminus domain  ali follow..  19  3.......NLFQDADGKPMKFYIKPCPTKGKVRPLIESCGRLAEPDTLTPLGYVSASFIFDSVANNALQDIESYM.......................................................................................................... 81
7 -5.710PF15098.6; E2RQ33_CANLF/23-156; TMEM89 protein family  ali follow..  16  8..................QVGLDLHPWGCQPNTLLGCPGHWMGMGMNRIYPVAGVTITTTMMLMISRAVLQRRRSQAAKLEHPQVTTNPSGPWKRRAPISDRALLRGVLHMLDALLLHIE............................................................ 115
8 -5.660PF09113.10; H3C439_TETNG/465-606; Peptide-N-glycosidase F, C terminal  ali follow..  19  3...........NKRLEPVRFSVPAPAQKVELYAVITAHGSDDRSCGEFCVLLNGVFN........................................................................................................................... 53
9 -5.560PF05560.11; A0A0D0NXX6_9BACI/1-182; Bacillus thuringiensis P21 molecular chaperone protein  ali follow..  20  65....................NMNSTEMGHKTYSFLNQTVLNNKGNSSLEEQVSNIFYRCVYMEVGKSSSYIKPLEQDSNKIRYVCSLLFIVPKNNITSIIPVNLQLTLLSKNVK.................................................................. 159
10 -5.500PF14421.6; C1N795_MICPC/486-700; A distinct subfamily of CDD/CDA-like deaminases  ali follow..  13  41.....LAVLCVRKKGKTGRVNLEVSMPTGSLCSERNVIGTALACDPTLRRAVLSLKKTGGEGSGSGNAQKGGVINGGVRDGGTAPPTPVPGSSFAGGASRNASYANDLSGLGSGPTCRPVAEDDLNPLH----CGACKEWLY-KIAEVNPGFKVVMFTDASCEEVFVKTVG......... 215

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.