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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -6.590d3o7ba_ c.116.1.0 (A:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  16  24.........................................................................................................................................................................................................................................................AVRADAIRRGKRPEKILLDDSKHHTAMKSLEFREKRGRPLLDSPLRDFEVYVHTLNGEIIWVNRETRLPRNYNRFVGLMEKLFEERRI--TAGDTTLIEFKDVGLRD. 137
2 -6.400d4uyma1 a.104.1.0 (A:50-518) automated matches {Aspergillus fumigatus [TaxId: 746128]}  ali model 3D-neighbors follow..  19  206................................................................................................................................................................................................................................................TETYMEIIKARRQAGSKKDSEDMVWNLMSCVYKNGTPVPDEEIAHMMIALLMAGQHSSSSTASWIVLRLATRPDIMEPLTYDNLQKLAKVIKETLRLHRAVKNPMAVDGTSYVIPTS 347
3 -6.260d3oiia_ c.116.1.6 (A:) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  21  17..................................................................................................................................................................................................................................................VLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPLLDSPINK--AGKLQVYGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITD. 142
4 -6.250d3cmco2 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}  ali model 3D-neighbors follow..  17  9..................................................................................................................................................................................................................................FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVE----------EVNAALKAAAEGE-LAYSEEPLVS. 131
5 -6.180d3eeqa2 c.152.1.1 (A:10-214) Cobalamin biosynthesis protein G, CbiG {Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  19  70........................................................................................................................................................................................................................................................................KYAKSKTEDPAIVCIDDKINYVIPLLG---GHWGADIARELSVILNSTPIITTAAEIKGKLSIERIANILI----KIINPENIVKINAALLRD 157
6 -5.930d3g39a_ c.10.2.0 (A:) automated matches {Sea lamprey (Petromyzon marinus) [TaxId: 7757]}  ali model 3D-neighbors follow..  13  2.............................................................................................................................................................................................................................................................CPSQCSCSGTTVDCSGKSLASVPTGIPTTTQV-LYLYDNQITKLEPGVLTRLDLDNNQLTVL-PAGVFDKLTQLTQLSLNDNQLFDNLKSLTHIWLLNNPWD.. 114
7 -5.730d3b6ha1 a.104.1.0 (A:23-500) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  206..............................................................................................................................................................................................................................................DHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLEEMGVSEEQGNMGPAAFWLLLFLPAAVRGELESILWQAEQ--PQKVLDSTPVLDSVLSESLRLTREVVVDLAMPMADGR.... 351
8 -5.720d6eo0a1 c.31.1.5 (A:28-298) automated matches {Zebrafish (Danio rerio) [TaxId: 7955]}  ali model 3D-neighbors follow..  12  1...........................................................................................................................................................................................................................................................KMTRPSSDLTAFREHFAKAKHIAIITGAGVSAESGVPTFRWAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEAITQNIDELHHRAGSKHVYEIHGSLFK.. 132
9 -5.710d3u2ua1 c.68.1.14 (A:1-262) Glycogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  7.......................................................................................................................................................................................................................................................................VTLTTNDAYAKGALVLGSSLKQHVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGTQYSKCVFMDAVLANIDDLFDRAAPDPGWPDCFNS.... 134
10 -5.590d2wfha_ c.10.2.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1.............................................................................................................................................................................................................................................................CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTE-LYLDGNQFTLVPKELLTLIDLSNNRISTL-SNQSFSNMTQLLTLILSYNRLFDGLKSLRLLSLHGNDISV. 113
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.