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Query: gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDIIANIASILGFTMQMNDKFFAHGMNKEQADNEMLLLFLKQLSVKSKAIKEIHQKYHSLSNDFRLVAVFLTNPVIYEKIVTNRSRALRNALKESLQTPSARIAQTQLSAQLRPCFENLLVSIKDESHLSVEFSGINDCEMKAILRKILNAQKEIFQLHQQFCGIMKTIGSYPLGNWGDSEFDFIKTNQRVFISDFYSIIDYADIILMGYLDIYHCALNLKLast
1 -6.450[T] KOG3294 WW domain binding protein WBP-2, contains GRAM domain  ali follow..  14  1...............MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTKSGA------LYLTS-IIF--MNESKKDEFK-----SFAMPFNSVRDVKLE---QPLLPNYLKGFDGCPEWRLSFPKGGCIEFGEALLRAADMASRARPFAAP............................................................ 142
2 -6.040[S] KOG4741 Uncharacterized conserved protein  ali follow..  15  82.........................................CEVIETAAASEVIKYEYHVLYSCSYQV------PVLYFRASFLDGRPLTKDIWEGVHECYKMRLLQGPWD---------TITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINKNVNYITSWLSIVGP.................................................. 198
3 -6.030[J] COG1383 Ribosomal protein S17E  ali follow..  19  4........................................VRTKTTKRASRVVIEKYYPRLTLDFQ------TNKRIVDEVAIIASKRLRNKLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINV----DQDTKDMLKAL......................................................................... 109
4 -5.760[J] KOG0187 40S ribosomal protein S17  ali follow..  25  4........................................VRTKTVKKAARVIIEKYYTRLGNDFH------TNKRVCEEIAIIPSKKLRNKLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEV----DPDTKEMLKLL......................................................................... 109
5 -5.460[U] KOG3479 Mitochondrial import inner membrane translocase, subunit TIM9  ali follow..  13  1.................................................................................MDALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKC-----SEKFLKHSERVGQRFQE............................................................ 76
6 -5.450[O] COG0386 Glutathione peroxidase  ali follow..  17  27...LIVNTATRCGLTPQYEA---LQKLYAQYTAEGLEILFREQAPESSGEIAQVCMMKFGTK--FKIFDKIEVN--LYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVN-RDGEVVERFAPSVTPEEIEADIRALL........................................................................ 177
7 -5.360[S] KOG4605 Uncharacterized conserved protein containing CDGSH-type Zn-finger  ali follow..  10  6....................QFYRMRITQSAQICLSVIKKSQKTGFGPNRLQRKGTHFVGTEPPVLKYHILQDKKPNEEYGLQGTNHELPGTGKVHSKLPTKVHMKKDKVYAWCSCGYSGSQPLCDGSHNSIRIPDLKLKPVRFIPDK----DMTVW-----LCNCKQT..................................................... 145
8 -5.280[T] KOG4428 Inositol-polyphosphate 4-phosphatase  ali follow..  15  750............GMLLRVQPVLFNVGINEQQTLAERFGDTSLQEVINVESLVRLNSYFEQFKEVLPEDCLPRSRSQ-LPELLRFLGQNVHARKNKNVDI-AAEICRRLNGVRFTSC------SAKDRTAMSVTL------EQCLILQHEHGMAPQVFT---QALECMRSEGC----NVGSRKYAF-NSLQLKAFPKHYR....................... 927
9 -5.200[C] KOG3495 Mitochondrial F1F0-ATP synthase, subunit epsilon/ATP15  ali follow..  17  5.................................................................AAVPFWRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLS.............................................................................................................. 51
10 -5.180[H] COG0302 GTP cyclohydrolase I  ali follow..  15  68..........FGGYSESPEEVLGTTFEEVAGYDDMVLVKDISFFSHCEHHMVPIIGKAHGLSKIARVVDIFARRLQTQESI----TAQIADSIQRILKPRGVAV-------------------MIEAEHMCMAMRSIRKQGSSTITTTFTGDFKEKADQQVRFMTLIRT..................................................... 213

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 1 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.