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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -9.080[K] KOG4797 Transcriptional regulator  ali follow..  23  676.................................................................................................................................................................................................................................................................................DSASGIDNKIEQAMDLVK---SHLMYAVREE----VEVLKEIKE--LVERNSLLEALLKSL-------SSNDQLSQLPTQQANP 752
2 -8.220[M] COG5597 Alpha-N-acetylglucosamine transferase  ali follow..  17  54..............................................................................................................................................................................................................................................SSKMAFVTMLTVRAANGENE-----VENTQQDWYYNSTRLLVHRLKSKYPVVVLAMKGIDQDQLQEDGAIVKVVDPLYAHYEYDRICFLDSPIKKMDKVFDVHQLSYSKDSVLFP.... 203
3 -7.970[K] KOG0773 Transcription factor MEIS1 and related HOX domain proteins  ali follow..  20  319.......................................................................................................................................................................................................................................................VRQELKHELKQGYKEKIVDIREEIL--------KRRAGKLPLKAWWQSHSPTELVQETGL---QLKQI------NNWF-----INQRKRNWHSNPSSSTVLKNKRKSNAG 422
4 -7.850[K] KOG3119 Basic region leucine zipper transcription factor  ali follow..  33  1....................................................................................................................................................................................................................................................................................................................................MSIVCTLEQKVNFFKAAATTKNLLILKNNTDTN 33
5 -7.550[K] KOG1318 Helix loop helix transcription factor EB  ali follow..  18  116.......................................................................................................................................................................................................................................................CPSSLPMKREITETDTRALAKERQKKDNHNLIERRRRYN-------INY-----IKELGTL---IPKSNDPDMRWN-----TILKAVEYI--KWLQKEQQRARELEHR.. 205
6 -7.430[S] COG3827 Uncharacterized protein conserved in bacteria  ali follow..  24  169................................................................................................................................................................................................................................................................QRHVAAAFQDLNHVVHSAPRRSFDEIAAELLPMLDWLDKNLP--------TLVERL-----------------VREEIERVVRGE................ 230
7 -7.420[R] KOG4227 WD40 repeat protein  ali follow..  22  816.....................................................................................................................................................................................................................................................QSDDSEERSLETICANHNNGRLHPRPPHPHNNGQNEVVAYSSP-TDRDNSSLTGTLLSEMACETPNAEDPTDTPATDSSRAVHSGLKR-QRIELEDTDSENSSSEKKLKT.. 942
8 -7.210[U] KOG0999 Microtubule-associated protein Bicaudal-D  ali follow..  21  666.......................................................................................................................................................................................................................................................DKDKEALMEEILKLKSLLSTKREQITTLRT-----LKANKQTAEVALANLKSKYENEKAMVTETMMKLKEDAAFSSLRAMDEYITQLDEMQRQLAAAEDEKKTLNSL... 781
9 -7.090[TZ] KOG1044 Actin-binding LIM Zn-finger protein Limatin involved in axon guidance  ali follow..  25  560.........................................................................................................................................................................................................................................................EPKIFPYE------MLMVTNRGRNKILREVDRT-------LE---RHLPEVFREIFGMSIQE---------FDRL---RNDMKKKAKLF................... 626
10 -7.070[S] COG1652 Uncharacterized protein containing LysM domain  ali follow..  14  579....................................................................................................................................................................................................................................................IAPPAPVPQVPAGPQTFEQAPLAESQNSVIIRRG------DTL----WQI----SR--RVYGQYLANEDQIRNPDIEPGIFGVKEALPNAEELHRKRLKSGS........... 674
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.