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Query: ACL93476.1, from C.crescentus

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIAKPLTVVPGFDVWPGLLDISAQRALVEAVLAGAEQAPFSNYRTAYGKPMSVAMTALGSLGWTSDARGYRYVDRHPETGRPWPDMPPALLDLWTVLGDPETPPDSCLVNLYRDGARMGLHQDRDEADPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSSSLVPGGGRINLTLRRARTALast
1 -80.400[L] COG3145 Alkylated DNA repair protein  ali follow..  47  2.....LVLPKGVRHMPAYLSRAIQDALVEDVRSIVQQAPLFVPAMPRTGEMSVRMTNCGPLGWVTRGYRYQPTHPLT--GEPWPPIPESLLDLWRQVSGYPNPPEACLINFYTADAKMGLHQDRDEADFSAPVVSVSLGDDCLFRVGQTTRDGATKSFRLKSGDVVVLGGEGRLAFHGVDRIYPSTSALLKNGGRINLTLRRVTKP 204
2 -63.100[A] KOG2731 DNA alkylation damage repair protein  ali follow..  29  224..NKHKVIRPGMVLLKDFLTPDIQVDIVKTCRELGKPTGFYQPGYSVGSKLHLQMMCLG-RNWDPQTKYRKNTDIDSKA-PEIPVTFNVLVEKAAERILPVMSPDICIVNFYSETGRLGLHQDRDEIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGVKSIIPNSAPSKLRTGRLNLTFRHF... 449
3 -45.100[S] KOG4176 Uncharacterized conserved protein  ali follow..  20  128..EWNKPLPRGLHIIADFVTEEEESTLLRAIGEDGRTSE---------VTGSLKHRNVKHFGFE-FLYGTNNVDPSKPLEQSIPSACDILWPRLNSFASDWSSPDQLTVNEYEPGHGIPPHVDTHSA-FLDPILSLSLQSDVVMDF---RRGDDQVQVRLPRRSLLIMSGEARYDWHGIRPKHIDVVPSASRGKRTSLTFRRLRKG 327
4 -20.400[S] COG3826 Uncharacterized protein conserved in bacteria  ali follow..  18  37.........AGNALLPGLLTPGACDALAALYPRDSLYRSRVAMARHGFGRAYPLPGLIEHLRTQLYPRLAPIANRWNQAMGIDVRYPAAHADFLRRCHDAGQLRPTPLILQYGPGDYNCLHQDLYGEHVFPLQVAILLGGEFVMTEQRPRMQSRPDVVPLRKGDAAVFAVSQRTMRHGVSRLR--------SGQRHTVGI...... 244
5 -15.700[S] COG3128 Uncharacterized iron-regulated protein  ali follow..  13  3GAGPTFWRTCMMYHIPGVLSPQDVARFREQLEQAEWVD--------------------GRVTTGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHAALPRTLSTPLFNRYQNNETYGFHVDHPQNGWMRTDLSATLGGELVV-----NDTFGQHRVKLPAGDLVLYPSSS---LHCVTPV--------TRGVRVASF....... 184
6 -15.600[B] KOG3844 Predicted component of NuA3 histone acetyltransferase complex  ali follow..  12  43LKKEIEDSQPNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQ------RDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDGGLRLF--PNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVD-------KHRLSIQ....... 242
7 -13.200[O] COG3751 Predicted proline hydroxylase  ali follow..  11  26LSREYHKNGPNHVVIRPLINDTLLRNVRKELMENIHFTEKVTDIYRVWQTGDLANLDGLDKKEQNMLKYLRQVRDALYS----EEFRSHVQKITGCGPLSASKKDL--VNVYSKGCHLMNHDDVIGTRCISYILYLV-GALRLF--PSFPAADFCHSIPPQWNQLSFFRVKPGHSFHDVEEVYVD-------KPRMAIS....... 225
8 -12.500[Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin  ali follow..  11  23..........GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVL-------RLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFPRVLSGYIAFTRDTGATLVVPGSHQYLARNAVPVQCAAGSLFVFDSTL---WHA-------AGRNTSGKDRLAINHQFTRS. 218
9 -11.000[I] KOG3290 Peroxisomal phytanoyl-CoA hydroxylase  ali follow..  10  53LTLEQRKFENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTL-PEILKYVECFTGPNIM--AMHTMLINKPPDSGKKTSRHPLHEHISRNNGCLVVLPGTHKGSLKPHDYENKARVHLVMEKGDTVFFHP---LLIHG-------SGQNKTQGFRKAISCHFASAD 286
10 -10.500[E] KOG1591 Prolyl 4-hydroxylase alpha subunit  ali follow..  15  322LKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGGQLKKSAFRVSKNAWL-----------------AYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPLSEVEQGGATAF-------PFLDIAVKPQLGNVLFWLDKDYRTKHAGCPVLKGS.................... 502
11 -9.780[S] COG4340 Uncharacterized protein conserved in bacteria  ali follow..  20  132......................................................................................................................GVHQDGFDHIAIVGI-NIVGGEIMLY---LSSHEAPFFRKVLENGEVAMLAD--SQLWHNACPIRTVDHQQEGHMDVFVLTAKDGRHA 216
12 -9.700[S] KOG4459 Membrane-associated proteoglycan Leprecan  ali follow..  12  469.........SQRVVMDGVISDHECQELQRLTNVAATSGDGYRGQTSPHTPNEKFYGVTVFKALKLGQEGKVPLQSAHLYYNVTEKVRRIMESYFRLDTPLYFSYSHLVVQAERKDDSHPVHVDNCILNAESAILYLN-GGNFYFT--ELDAKTVTAEVQPQCGRAVGFSSGTENP-HGVKAVT--------RGQRCAIAL...... 674
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.