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Query: ACL93482.1, from C.crescentus

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSEALKPGGGIKPDLPFTPVRVAVLTITDTRDEASDTSGQILVERIKAAGHELGGRVVVRDDIEQIRAQVRSWIDSKTVDAIVTTGGTGLTGRDVTVEALEPLFDKKIDGFSVVFHLVSYASVGLSTLQSRATAGLIESVFVFCLPGSNGAVKDGWDKVIAAQLDSRHKPCNMVELMPRLLERLast
1 -58.300IDP06143 gene: mogA; molybdenum cofactor biosynthesis protein MogA [Helicobacter pylori J99] NP_223453 [Helicobacter pylori J99]  ali follow..  23  1................MQTIHIGVLSASDRKGVYEDLSGKAIQEVLSEYLLNEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTA-ILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNE.... 166
2 -27.400IDP00941 gene: moeA; molybdopterin biosynthesis protein MoeA STM0846 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  18  164...PVLASLGIADAQVVRKVRVALFSTGDEAGQIYDTNRLTIHLMLQQLGCEVINLGIIPDDPGKLRAAFIDAD--SQADVVISSGGVSVGEADYTKTILEELGE-------IAFWKLAIKPGKPFAF------GKLSNSWFCGLPGNPVSAALTFYQLVQPLLAKLGG.............. 323
3 -8.100IDP01204 glycosyl transferase, group 2 family protein BA_2274 [Bacillus anthracis str. Ames]  ali follow..  17  20.........................................................IVKNESRIMERCLNATKSIVDFVSICDTGST-----DHTPEIIENWCKEEIPGTVHHEPFKNFGYNRSLAV-SLAQKTYPEADYLLILDAD................................... 105
4 -7.250IDP02121 Short-chain dehydrogenase/reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT0360 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  7......................TILITGCSHGGI----GYATAVHLKNLGHRVFASAYLIDNYEYIDNALADILNKGSLDVIFNNAGYGQA-EDIDTKFLKQQFETNVFGLHNLTYKAIMRKQGYGKIIQHSSVL------LVAMKGAYNASKYAIEGLTDTMRLELR............... 169
5 -6.910IDP01965 hydrogenase-1 small subunit [Salmonella typhimurium LT2] STM1786 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  43..........AWALENKPRIPVVWIHGLECTCSFIRSSHPLAKDVILSLISLDYDDTLMAAAGAQAEEVFDDITTRAGKYILAVEGNPPLGEQGMFIEKLKKAAAGAIIAWGNCASWGCVQAARPNPTQATPIDKVITDKPIVKVPGCPPIPDVMSAIIT....................... 206
6 -6.590IDP91649 hypothetical protein Rv2795c [Mycobacterium tuberculosis H37Rv] NP_217311 [Mycobacterium tuberculosis H37Rv]  ali follow..  16  1........................MTWKGSGQETVGAEPTLW---------------AISDGHLGNKPVAESLYPSSPDDWLIVAGDVA-ERTDEIRWSLDLLRRRFAK--------------------------------VIWVPGN................................... 79
7 -6.520IDP02594 putative hydrogenase-1 small subunit [Salmonella typhimurium LT2] STM1539 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  9  43..........AYALENKPRTPVIWLHGLECTCSFIRSAHPLAKDAILSLISLDYDDTIMAAAGQQAEQALADVMREKGNYIVAVEGNAPLNEDGMFLEKLKRVSADAIIAWGSCASWGCVQAARPNPTKATPVHKLITDKPIIKVPGCPPIPEVMSAVIT....................... 206
8 -6.420IDP01719 ribose-5-phosphate isomerase B [Bacillus anthracis str. `Ames Ancestor`] GBAA5560 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  1.....................MKVVIASDHGG----NIRKELVSLLEELNIEYIDLGC-SVDYPDFAFPAAEMVANGEVDRGILVCGTGIG---------MSIAANKVNGIRCAL----------HDTFSARATREHNDTNMLAMGERVIGAGLARDIA........................ 121
9 -6.400IDP01116 glycosyl transferase, group 2 family protein BA_1693 [Bacillus anthracis str. Ames]  ali follow..  19  1.............................................MIVIKPFILACLIVKKRKDILGKCLYSLESIGGEIIIVDNGST-----DKKKEIAQKLTDK............................................................................. 56
10 -6.350IDP91723 gene: HNRNPK; heterogeneous nuclear ribonucleoprotein K isoform b [Homo sapiens] NP_112552 [Homo sapiens]  ali follow..  10  24AEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSRILSISADIETIGEILRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDR---------------------------VVLIGGKPDRVVECIKIILDLISES................. 216
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.