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current user: public |
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Query: ACL93481.1, from C.crescentus |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . | |||||||
# | Score | Template | Links and tools | %id | First | MSKLTHIDDQGRARMVDVSEKPATAREAVAAGFVRMSAETLALAISGSGRKGDVRAVAELAGVMAAKKTSDLIPLCHPLALSKVEVAVEPADGGLSVTARVKTTGPTGVEMEALTAASVACLTIYDMLKAAEKGMVIEAVRLLEKTGGKSGDWKADQP | Last |
1 | -93.900 | sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3 | ali | 49 | 30 | .EQLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAGVQAAKVTSQLIPLCHHVALSHIQVQLELDSTAVKIQASCRARGPTGVEMEALTSAAVAALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHR... | 185 |
2 | -59.500 | sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3 | ali | 50 | 180 | .EQLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAGVQAAKVTSQLIPLCHHVALSHIQVQLELDSTAVKIQASCRARGPTGVEMEALTSAAVA...................................... | 300 |
3 | -7.030 | sp|A8MWY0|K132L_HUMAN UPF0577 protein KIAA1324-like OS=Homo sapiens GN=KIAA1324L PE=2 SV=2 | ali | 20 | 120 | ...................................................................ESAEACPLCTEHDFHEIEGACKRGFQETLYVETVDFWLKVGAGVGAFTAVLLVALTCYFWKK--NQKLEYKYSKLVMTTNSKECELPAAD. | 228 |
4 | -6.700 | sp|Q6UXG2|K1324_HUMAN(removed signalp:1-41) UPF0577 protein KIAA1324 OS=Homo sapiens GN=KIAA1324 PE=2 SV=2 | ali | 15 | 60 | ...................................................................ESAAACPLCSVADYHAIVSSCVAGIQKTTYVKTIDFWLKVGISAGTCTAILLTVLTCYFWKK--NQKLEYKYSKLVMNATLKDCD...... | 163 |
5 | -5.820 | sp|Q9UFV3|YO007_HUMAN Putative uncharacterized protein DKFZp434L187 OS=Homo sapiens PE=2 SV=2 | ali follow.. | 17 | 2 | .....................AETYRRSRQHEQLPGQRHMDLLTGYSKLIQSRLKLLLHLGSQPPVGKTFFFSCWCHPLSKTTPNVWYKFSETALSILNSCQA-SQLGVRKMPGDMSSSPRVREFSALVAIKEKIHI--LPTNAKVGSKFGS...... | 132 |
6 | -5.790 | sp|Q99814|EPAS1_HUMAN Endothelial PAS domain-containing protein 1 OS=Homo sapiens GN=EPAS1 PE=1 SV=3 | ali | 17 | 26 | ......VTNRGR----TVNLKSATWKVLHCTGQVKVYNNCPPHNSLCGYKEPLLSCLIIMCEPIQHPSHMD-IPLDSKTFLSRHSMDMKF------TYCDDRITELIGYHPEELLGRS-----AYEFYHALDSENMTKSHQNLCTKGAKHGGY..... | 166 |
7 | -5.730 | sp|Q9H6X5|CS044_HUMAN Uncharacterized protein C19orf44 OS=Homo sapiens GN=C19orf44 PE=2 SV=1 | ali | 57 | 277 | ..............................................................................................................IEALTAYSPAVLALHDVLK............................. | 295 |
8 | -5.690 | sp|P31431|SDC4_HUMAN(removed signalp:1-18) Syndecan-4 OS=Homo sapiens GN=SDC4 PE=1 SV=2 | ali follow.. | 17 | 109 | .................................................................................NKVSMSSTVQGSNIFERTEVLAALIVGGIVGILFAVFLILLLMYRMKKKDEGSYDLGKKPIYKKAPTNE........ | 177 |
9 | -5.510 | sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2 | ali | 20 | 191 | ...LKAIKEMGFTNMTEIQHK------------------SIRPLLEGR----DLLAAAKTG---SGKTLAFLIPAVELI-------------------VKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIM---GGSN........ | 290 |
10 | -5.460 | sp|Q96RL1|UIMC1_HUMAN BRCA1-A complex subunit RAP80 OS=Homo sapiens GN=UIMC1 PE=1 SV=2 | ali | 30 | 130 | ........................................................................IPFC-----------------------------PDGVDPNQYTKVILCQLEVYQ------KSLKMAQRQLLNKK--GFGEPVLPRP | 178 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |