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Query: ACL93486.1, from C.crescentus

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210
# Score Template Links and tools%idFirst MTQRDTGRLDAIVLAAGRGVRFGGGKLTALLDGDPLVAAALLTAFLAPARRVVVAVGPEPDVRQAVEATATRLLARERLVLVPIDDPSAGMGASLAAAARSLPGDTDGVFVFLGDMPRIDPATPRHLAAALRDPGDIVAPTYLGRRGHPVLFGARWAPVLGALSGDEGARAIVDKAGESLVLVPVDDPGVHLDVDRPSDLARVQTDRRTLLast
1 -20.500sp|A4D126|ISPD_HUMAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Homo sapiens GN=ISPD PE=3 SV=2  ali follow..  16  40.PGRHPQAVAAVLPAGGCGERMGVPKQFCPILERPLISYTLQALERVCIKDIVVAVTGEN------MEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQIN-VVIIHDRPFVEEGVLLKVVTAAKEHGAAGAIR---ASEMPQAFLFDVIYEAYQ-FGTECLQLALKYCCTKAKLVEGSPDLW--KVTYKRDLYAAESIIKE. 279
2 -15.200sp|Q9Y5P6|GMPPB_HUMAN Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2  ali follow..  17  1........MKALILVGGYGTRLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRL-GIRISMSHEEE-PLGTAGPLALARDLLSETADPFFVLNSDV--ICDFPFQAMVQFHRHHGQEGSILVT-KVEEPSKYG------VVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQL........ 188
3 -14.300sp|Q13144|EI2BE_HUMAN Translation initiation factor eIF-2B subunit epsilon OS=Homo sapiens GN=EIF2B5 PE=1 SV=3  ali   11  36.EEEPPPPLQAVLVADSFDRRFDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNVVRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDV--ISNINITRALEEHRLRRK.......................................................................... 173
4 -14.000sp|Q9NR50|EI2BG_HUMAN Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1  ali follow..  20  2.......EFQAVVMAVGGGSRMSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQKALCAEFKMKMKPD----IVCIPDDADMGTADSLRYIYPKLKTD---VLVLSCDL--ITDVALHEVVDLFRAYDASLA....................................................................... 129
5 -13.600sp|Q8NFW8|NEUA_HUMAN N-acylneuraminate cytidylyltransferase OS=Homo sapiens GN=CMAS PE=1 SV=2  ali follow..  16  38.GVEKPPHLAALILARGGSKGI-PLKNIKHLAGVPLIGWVLRAALDSGAFQSVWVSTDHDEIENVAKQFGAQV-------HRRSSEVSKDSSTSLDAIIEFLNNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGY-EIQKGVREVTEPLNLNPAKRPRRQDWDGENGSFYFAKRHGGKMAYYEMRAEHSV-DIDVDIDWPIAEQRVLR. 263
6 -11.200sp|Q96IJ6|GMPPA_HUMAN Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1  ali follow..  14  2........LKAVILIGGKGTRFEVPKPLFPVAGVPMIQHHIEACAQPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQ-EFAPLGTGGGLYHFRDQILAGSEAFFVLNADV--CSDFPLSAMLEAHRRQRHIVENPQTHE--KPYLFSPEALKPLRDVFQRN-EQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASR..... 259
7 -9.280sp|Q76KP1|B4GN4_HUMAN(removed signalp:1-28) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B4GALNT4 PE=1 SV=1  ali   14  38LAWRQDVMVHFIVPVKNQARWV-----------AQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNF--ERSAGLQAGVDAVED--ASSIVFLCDLHIFPPNILDGIRKHCVEGRLAFAPV..................................................................... 164
8 -8.740sp|Q3KQV9|UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=2 SV=2  ali follow..  11  98FRQISLNKVAVLLLAGGQGTRLGYPKGMYRVGRKTLYQLQAERIRR----------------VEQLAGERHGTRCTVPWYVMTSEFTLGPTAEFFREHNFFHLDPANVVMFEQRLLPAVTFDGKVIL----RKDKVAMAP-----DGNGGLYCALEDHKILEDMERRGVEFVHVYCVDNILVRLADPVFIGFCVLQGADCGAKVVEKAY. 287
9 -8.700sp|Q9Y673|ALG5_HUMAN(removed signalp:1-31) Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1  ali follow..  13  28IWDSPTKQLSVVVPSYNEEKRL-----------PVMMDEALSYLEKRQKREVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVK-NRGKGGAIRMGIFS----SRGEKILMADADGATKPDVEKLEKGLNDLQPW-------PNQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKG------DTQCGFKLFTRE.... 213
10 -8.520sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3  ali follow..  13  95LFQISQNKVAVLLLAGGQGTRLGYPKGMYDVGRKTLFQIQAERILK----------------LQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIIL----EKNKVSMAP-----DGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADC.......... 275

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 8 8 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Rychlewski L, Godzik A. Sensitive sequence comparison as protein function predictor. Pac Symp Biocomput. 2000;:42-53.