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Query: ACL93468.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYALVRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDRIEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPDRLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLGLast
1 -2.600PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443;  ali follow..  12.....................................................................................LLLSPLLCQAQKNLFNKYNDMKGVSSVYISKAMMELNPNLFMKDLY----------GKVAEHLNSVQVLSTHDNKVREEMAKDIRSLVLMKQKSTVSGSEVYVNRKGSKVKELIMVMNGASSLKFVYMEGD------MTTDDIKKLMLYFIISGDLFYANNKPVTYFKKGNSDNQKDMAELSGTYNLNSIDTNYKEELSTLNDKLKRIDQGLKNMN 225
2 -2.590HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;  ali follow..  6...........................................................................................................................................................................................AIPMKAFDPNYKLLDEMYQDDYYPAFLVDKVKDELQKVIDLLESGETDTEVI-------QETLDEAVCGINDLQEEFDENDSEIETVARDCIGVTVAYILEWFGIPIDIEEAIR 112
3 -2.250PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  49....................................................................................................................................................AVIRRTLGAPGTFDNDTGNDGAWLRIGLGEVYISTGSLYLCTTAFLPLGLP...................................................................................................... 107
4 -2.020PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  24............................................................................IDNYEEPSETIWGEVVDEATGKRVLTDQGSEGIR--------VRLTELSWGDNVQHNPDFYCMMDGTFNTKIFKGEYNVRIDGPFIPLVRENTDG-------TLLHDGSVNTEISGTTKVKFEVQPFLNVEFVGNPQVSNGVIKAQVRVTRGVS....................................................................... 163
5 -1.930HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  3........................................................................................................................................................................................................................................................KKKRGEERMKEEDNILKKVG---FKVPEGYFENLTSEVMGKLPEKEGPA.... 52
6 -1.820PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;  ali follow..  14  144.................................................................FLRTVTNAETLISELEGKPRQVNRLAATRIMRVLTFQR-------LTDVYGD-VPYFDAGKGALEGEFTPHYTRQDSIYMDLHDELRAAVDQFDASQ-PTFGGADLFFNGIEQWKRFANSL................................................................................................................... 256
7 -1.670HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  113.............................................................................................................................................GNAYTQIAKYNTFLENITDCPMEESKKEQ--WSAEVKCLRAYFFLNLAFY----TDVPMPLKTLSVDEANSISQ------TPQTEVYSQVEKDLKTAIDLLPVHYLRGIWRLPG.............................................. 215
8 -1.640PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  13  2..............................................................................................................................................KYVKILFAMALVLTMCSAFSLKKGHSKTVYAFGIA-ASFTDTVVYFTD-------------------------QILDSAKVSKEGFLTHRDL------------YSY--QLKNYVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRN...... 115
9 -1.570PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  13  10......................................................................AHFKRYIKEHVKGKKTGLFITLGEHGESMLKVGRELLNEGGNEILAEFIKVIEEMKEMAAKMGDKAIHLITPERQATWKQ---ASTHPDENDLKNARK..................................................................................................................................... 116
10 -1.530PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]  ali follow..  14................................................................................................................................................YAEFASVTELYTDEKGCVSITIGLGDIHIRAGHVRTQEEITLILNDNLDSWEMCEVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIESY-HLAKGNFMEIYRFLTVDGNNVDSNQDRLALLKTLKVKDYKDVTASVLE............. 189

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.