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Query: ACL93471.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLILGLTGSIGMGKSTTSKMFQDEGVPVYDADAAVHALYASGGAAVAPVETAFPGVVVDGAIDRAKLSAQVVGNSEALAKLEAIVHPLVGAHRIGFFEQAKAEGHEIVVLDIPLLFETGGEKRVDKVVVVSAPAEVQRERVLARPEMTPEKFEAILARQTPDADKRARADFVIDTGQGLDHARRQVRDLLTLLRTARSALast
1 -2.460HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  15  12....................................................................................................................................AEKEQVETQLAQEQHKLKRLENRKK-YLEKGERQKRTHRLCNLGGTIESLAPEFKDLTRT....... 70
2 -2.360PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  13  133......................SRVVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLH-TIRETDLFEIFSSQVENKNVIDSLMGKYLDG............................................................................................................ 200
3 -1.890PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371  ali follow..  29..........ASGENNEMLIVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKNSILKHAKNIVVAFSLEGNSLDSEILRRNFNSESLDKIQSDSSLF---------YFVRRNQYARGQVVLYLFSENDDDLYSKIKRNKFFDDELKKRVDTEIFRKVENNLMDKIFTDHN...................... 195
4 -1.870PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]  ali follow..  11  27..........EKGCVSITIGLGDIHIRAVKDGFFAEAMGHVRTQEEITLI----------------LNDNLLSKDWVTDSWEMVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIESYYDE---ALAENVPDAKEILHLAKGNFMEIYRFLTVDGNNVDSNQDRLALLKTLKVKDYKDVTASVLEDHLKVRESS 198
5 -1.850PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  11  1...................LIAPDGSFPPVGRSIAYRCGAFQLLAQMALRRELPEGVAPAQVRGALTAVI................................................................................................................................. 51
6 -1.700PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  11..............................................................EQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDY-AVSSFAEKAEKLKYKQKYEQAEKS-----ASVWKRRFEALNEKYLELKKKAQPYLDA 141
7 -1.690PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  1MSILKITEELQNLGNAGKDNRQRVANIVLENKELFEPLLEKAAWVLEWICTHHQLSWMIPHLTF-------------TENLKNLTFDSAIRPCAKICEHLANAYYSKRDNEFSKLKNEHIQEIIETGFDWLITPQKIAVRAYTMNTLYL------FGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS 193
8 -1.690PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  11  1.............................................................................MKYVKILFAMALVLTMCSAFSLKKGHSKTVYAFGIAASFT-------DTVVYFTDIQILDSAKVSKEGFLHRDLYSYQLKNYVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRN. 115
9 -1.620PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)  ali follow..  12  47TMYLAMDAGLKGSDNDVQVLL------VYDKQSGKLEHCLPSDLKNELDGVAFKASLGEFSFMAAPSEGFVSRGDLYLDLLQIVL.................................................................................................................. 125
10 -1.600PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  3............................................................TTTTNELPAEIMENGIHYTLVGDYYFPTCMLGDKSPNGKWASLYERYLQEKHPHEYVR---------LIWADELAALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQM----QRMEMICGRVEEVVCE....... 124

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.