current user: public |
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Query: ACL93471.1, from C.crescentus |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . | |||||||
# | Score | Template | Links and tools | %id | First | MLILGLTGSIGMGKSTTSKMFQDEGVPVYDADAAVHALYASGGAAVAPVETAFPGVVVDGAIDRAKLSAQVVGNSEALAKLEAIVHPLVGAHRIGFFEQAKAEGHEIVVLDIPLLFETGGEKRVDKVVVVSAPAEVQRERVLARPEMTPEKFEAILARQTPDADKRARADFVIDTGQGLDHARRQVRDLLTLLRTARSA | Last |
1 | -2.460 | HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; | ali follow.. | 15 | 12 | ....................................................................................................................................AEKEQVETQLAQEQHKLKRLENRKK-YLEKGERQKRTHRLCNLGGTIESLAPEFKDLTRT....... | 70 |
2 | -2.360 | PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380; | ali follow.. | 13 | 133 | ......................SRVVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLH-TIRETDLFEIFSSQVENKNVIDSLMGKYLDG............................................................................................................ | 200 |
3 | -1.890 | PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371 | ali follow.. | 7 | 29 | ..........ASGENNEMLIVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKNSILKHAKNIVVAFSLEGNSLDSEILRRNFNSESLDKIQSDSSLF---------YFVRRNQYARGQVVLYLFSENDDDLYSKIKRNKFFDDELKKRVDTEIFRKVENNLMDKIFTDHN...................... | 195 |
4 | -1.870 | PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg] | ali follow.. | 11 | 27 | ..........EKGCVSITIGLGDIHIRAVKDGFFAEAMGHVRTQEEITLI----------------LNDNLLSKDWVTDSWEMVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIESYYDE---ALAENVPDAKEILHLAKGNFMEIYRFLTVDGNNVDSNQDRLALLKTLKVKDYKDVTASVLEDHLKVRESS | 198 |
5 | -1.850 | PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] | ali follow.. | 11 | 1 | ...................LIAPDGSFPPVGRSIAYRCGAFQLLAQMALRRELPEGVAPAQVRGALTAVI................................................................................................................................. | 51 |
6 | -1.700 | PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8] | ali follow.. | 9 | 11 | ..............................................................EQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDY-AVSSFAEKAEKLKYKQKYEQAEKS-----ASVWKRRFEALNEKYLELKKKAQPYLDA | 141 |
7 | -1.690 | PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152] | ali follow.. | 7 | 1 | MSILKITEELQNLGNAGKDNRQRVANIVLENKELFEPLLEKAAWVLEWICTHHQLSWMIPHLTF-------------TENLKNLTFDSAIRPCAKICEHLANAYYSKRDNEFSKLKNEHIQEIIETGFDWLITPQKIAVRAYTMNTLYL------FGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS | 193 |
8 | -1.690 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 11 | 1 | .............................................................................MKYVKILFAMALVLTMCSAFSLKKGHSKTVYAFGIAASFT-------DTVVYFTDIQILDSAKVSKEGFLHRDLYSYQLKNYVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRN. | 115 |
9 | -1.620 | PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete) | ali follow.. | 12 | 47 | TMYLAMDAGLKGSDNDVQVLL------VYDKQSGKLEHCLPSDLKNELDGVAFKASLGEFSFMAAPSEGFVSRGDLYLDLLQIVL.................................................................................................................. | 125 |
10 | -1.600 | PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete) | ali follow.. | 9 | 3 | ............................................................TTTTNELPAEIMENGIHYTLVGDYYFPTCMLGDKSPNGKWASLYERYLQEKHPHEYVR---------LIWADELAALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQM----QRMEMICGRVEEVVCE....... | 124 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |