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Query: ACL93473.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAQFQTLIVEAPESAPGVTLIRLNRPEALNALNTALLGELAQALAAAQADDSVGCIVLTGSAKAFAAGADIKEMSDKTYAQMFKADFFTAGARAIEQCRKPIIAAVAGYALGGGCELAMMCDFILAADTAKFGQPEINLGVAPGIGGTQRLTRFVGKSKAMDMILTGRMMGAEEAERSGLVSRIFPADSLVDETLAIAAKIAGQSPLAVAMNKELVEAAYETTLTTGVALERRLFHSLFAFEDQKEGMTAFVEKRKPLFKGALast
1 -3.430PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  13  90.......................KPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETSEMSSDEEIVIIKNGDKETPVVVDIRGVLV-GVDNVQIKKTIIEAVTRV-LDVPSHRVAVAP....................................................................................................................... 224
2 -2.680HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;  ali follow..  7  8....................................................................................................................................................QKARKVLGEANYFSTVVFIFIAVLLLAFIIDLFSIISTKQELDHAADQMVKQIQLSGGVNGETDELFEFLSSQIEGAENISYSIDATYTSPRPSGMTNAIQ............. 112
3 -2.100PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  8  227..........................................................................................................................IYFAPWESYFLLAEAAEGWISNITPKEAYEL--GIRSSFEY--ADQYINSTTRNRLGTSVAFDDTVEPTSEVMTYRDGYTNTDQIQEVVYNYPTASKTLYGKAMNDHLTKIITQKYIAQ---YQVLEIWNDHRRLGL... 365
4 -2.030PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  8  127........................................................................................................................AKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKL---TEIIRRNDIQSVTIVRMEVP-EMAAKKALQDSGKFIPWQVATISIDGRIL.............................................. 223
5 -1.970PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  14  21.......................................LLFYCNFLKGVFLLRIAVVDGQGGGI--GKHITARLRQELPPEV----------EILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGTPAMAAAIAASPARKFLL---PINRSGVEVIGVTPE--PLPHLIEALVNRVKFFYQEGGD....................................................... 173
6 -1.910HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;  ali follow..  10  101ITPLDRLCYVGKRGMGALEFEPSSPINGMNESSVLHIEELTELAKSVFTDRMAFQVQLRQEGRNLKVGT................................................................................................................................................................................................. 173
7 -1.880HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  14  19................................................................................................................................................................RELLLIGKRKDEDDMAKSTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESVLGCPIEEEDLPK-LIGFLKRQETNGK.. 119
8 -1.780PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  13  17...........................................................................................IESQTILKDAAATALYGSRGANGV-------VLITTKSGRRGKTHIAFTAEYG...................................................................................................................... 62
9 -1.780PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  9  115.....................YLDGHELADPVPPEMDRQFLEAIKEVSARRMISTYYLMGEG--FSGAE-------------SGKSWMNLSLKQLCAMKRHVFAGQNLYARGACYHSFDQGSFGRKPGFIAANAGLLDIYLRSVHKHAPQKLILAAAGTPWYSAVSRKAIIIDGQEQLIIRMRDPLTNFEQTVVMT----LDALPQRPPKTTKLLIETSFQSETDCHIRVTDMGFGEIFAATGK.................. 320
10 -1.750PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  9  22...............GDVLKIECVNPAMLARIRSTHLLTFHHPDNKRERRVVMSVLKVIQKIHEIYPEASVENIGETDFIVTYEEQDGKGGVIHVAKIVMVVMISFFGAAFS----MAFNNDVGVTKMFGQI---ELLTGTKSNGFTILEFMYCIGIIIGILTFFN................................................................................................ 167
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.