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Query: ACL93475.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTMKGGVASQDFSAAIATACEPAANVWSKVCVALKRELGDAAFGSWIAPAMLREAATGDVVLVTSTGIARDWIRRSAWRRIGELWAAHDATGRRIDLKSRLEFEAAAGAYVEATPKAVAAEPIEIVLPVSTDAPTVVAPSAKSPRTQGLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHLLNALAWEAMRNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIAGKQSTQEELFHTLTALVGEGGRVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNLRLGILERKIQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMTLDEVQAILRPHLRSGEKRITIDDIQKATAEHYGMKQADLLSERRNRAVARPRQAAMWLAKQLTTRSLPDIGRRFGGRDHTTVLHAVRRIEALRAEDSALSHDLETLTRKLRGLast
1 -3.200PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  10  12.....................................................................................................................................................................................................LVLTMCSAFSLKKGHSKTVYA-AASFTDTVV----------YFTDIQILDSAKVSKEGFLTHRDLYSYQL-YVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTVT.................................................................................................................................................................................. 119
2 -2.800HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075;  ali follow..  8  1..............................................................................................................................................................................................................MSREKRKAKKEAEKRLSTRQFIGAKEITDYSLVTYGQGELVYFIVKPTNISVLSESSVGARIYALMTVLKGVAEIEMLCLNSRESFEDNKRFLKSQME-------QEENPVIRRLLEQDQTHLDRIQVQMATAREFLIMLRLKDEKESDIFPYLSRIEKSLKEQSFSVKRADKEDIKRILAVYYEQNVTTEKFEDF........................................................................................ 189
3 -2.740PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  13  1..........................................................................................................................................................................................................................................................MTDSLFWA------KNQFHGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSE-------VLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQ--QSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNN-SFPHEIGLFI-----GYPAKDVAAFMGLVRLPFTCQRLWKIYGNPARSLALAEQYRCCRNKM.. 224
4 -2.540PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  10  70..................................................................................................................................................KAGSSPIQHDIMLLGALTALGACMSRHVRCLYGGKYHHPSLQAPSASGKGILVEPIHDEIRKEVTIQMKAY---KKEKAEYDAMGKERTKKEAPQMPPNRMFLISGNN--------TGTGI---LQNIMDSDGTGLICEA----EADTLSTAIGS--DHGHWSDT------LRKAFDHDRLSYNRRTDQEYREVKKSYLSVLISGTPSQVQTFDGSYSRQLYYYMCGISKWIGLEWKEKLSVIKTHGIHTLQLDEQKEEIDTVFSDLFERSSVANGREMYSFVARLAVNLCR-------------------MSEVAVLRALESPQPYDFKTSPTSP........ 394
5 -2.290PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  13  46........................................................................................................................................................................................................................................................................................................................................................IKFTSDLERRRYLILRRKTRKVWPYAKLASE--RLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTRTE---------QILVKLIHRQTGVTTFQLIKNLRSGWRAFWYDTTAGLPVNNREDFLIEDILQRSFQR... 188
6 -2.200PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  12  3...................................................................................................................................................NFKEKIQFSKIRSRSCPFMQQNKFRKAIVAILMPMILVVSFGNC-FGKFAIVKKVYEVNDGFNIGSGL----LAKFIKTLVMYFPFSILYFV------FDLILFNLIEFWSGNNPVGYN--KYVKAYEENGEKLLLSYSDFGKRLDIQFAK................................................................................................................................................................................................ 149
7 -1.830PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  9  11.................................................................................................................................................................................................NMLFHIDENAYQKLLRYLEAVKRSFAGTAGSDEIIADIEARIAELFYEKMEN-QVITQKEVDAVIAIMGQPEDY............................................................................................................................................................................................................................... 85
8 -1.660HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  13  2.......................................................................................................................................................................................PYRLLPNTDQARIRALKTAVVKGDMCDVYDLPVLGEARIFLSKFETAHQSRNSKKHQANVKTARLYISHFIQVLN-RMEIKESHKALYGLPVDNFSVPDLSSE---ASLAEWGQKIRKRTSQG-----GIPIYNPTIAKVKVHYDI------MEGYEKQKSLQSLTNRSLEQLASMRVQADRLIL-----------------IWNQVEAKFQDVSPNEKRLEKCRDYGLIIIIGPEKNRIRKICLSIHIPIFFWK-----SLQKITFRYG..................................... 260
9 -1.630HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  10  1....................................................................................................................................................LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAEN------------------------IKRIECANLLHTAEACIEWHAWYQNEENELHIREGSRYDGYFEKVAQRISEIMT------------EIRETILRLKYETPETEKIIGVEYYQAVIR-------DGVRDYSG................................................................................................................................. 185
10 -1.580HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  7  11.........................................................................................................................................................................................................................................................LLERIRDIRASEK---RVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNKLEYAATGHTAPELIAKRADASKDNMGLTSFKGVKVRRGDVTVAKN---YMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDFLRFNGRTVKREVAEKLALEQYE............................................................................... 173
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.