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current user: public |
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Query: ACL93475.1, from C.crescentus |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 | |||||||
# | Score | Template | Links and tools | %id | First | MTMKGGVASQDFSAAIATACEPAANVWSKVCVALKRELGDAAFGSWIAPAMLREAATGDVVLVTSTGIARDWIRRSAWRRIGELWAAHDATGRRIDLKSRLEFEAAAGAYVEATPKAVAAEPIEIVLPVSTDAPTVVAPSAKSPRTQGLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHLLNALAWEAMRNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIAGKQSTQEELFHTLTALVGEGGRVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNLRLGILERKIQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMTLDEVQAILRPHLRSGEKRITIDDIQKATAEHYGMKQADLLSERRNRAVARPRQAAMWLAKQLTTRSLPDIGRRFGGRDHTTVLHAVRRIEALRAEDSALSHDLETLTRKLRG | Last |
1 | -3.200 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 10 | 12 | .....................................................................................................................................................................................................LVLTMCSAFSLKKGHSKTVYA-AASFTDTVV----------YFTDIQILDSAKVSKEGFLTHRDLYSYQL-YVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTVT.................................................................................................................................................................................. | 119 |
2 | -2.800 | HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075; | ali follow.. | 8 | 1 | ..............................................................................................................................................................................................................MSREKRKAKKEAEKRLSTRQFIGAKEITDYSLVTYGQGELVYFIVKPTNISVLSESSVGARIYALMTVLKGVAEIEMLCLNSRESFEDNKRFLKSQME-------QEENPVIRRLLEQDQTHLDRIQVQMATAREFLIMLRLKDEKESDIFPYLSRIEKSLKEQSFSVKRADKEDIKRILAVYYEQNVTTEKFEDF........................................................................................ | 189 |
3 | -2.740 | PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346; | ali follow.. | 13 | 1 | ..........................................................................................................................................................................................................................................................MTDSLFWA------KNQFHGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSE-------VLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQ--QSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNN-SFPHEIGLFI-----GYPAKDVAAFMGLVRLPFTCQRLWKIYGNPARSLALAEQYRCCRNKM.. | 224 |
4 | -2.540 | PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483] | ali follow.. | 10 | 70 | ..................................................................................................................................................KAGSSPIQHDIMLLGALTALGACMSRHVRCLYGGKYHHPSLQAPSASGKGILVEPIHDEIRKEVTIQMKAY---KKEKAEYDAMGKERTKKEAPQMPPNRMFLISGNN--------TGTGI---LQNIMDSDGTGLICEA----EADTLSTAIGS--DHGHWSDT------LRKAFDHDRLSYNRRTDQEYREVKKSYLSVLISGTPSQVQTFDGSYSRQLYYYMCGISKWIGLEWKEKLSVIKTHGIHTLQLDEQKEEIDTVFSDLFERSSVANGREMYSFVARLAVNLCR-------------------MSEVAVLRALESPQPYDFKTSPTSP........ | 394 |
5 | -2.290 | PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733; | ali follow.. | 13 | 46 | ........................................................................................................................................................................................................................................................................................................................................................IKFTSDLERRRYLILRRKTRKVWPYAKLASE--RLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTRTE---------QILVKLIHRQTGVTTFQLIKNLRSGWRAFWYDTTAGLPVNNREDFLIEDILQRSFQR... | 188 |
6 | -2.200 | PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104; | ali follow.. | 12 | 3 | ...................................................................................................................................................NFKEKIQFSKIRSRSCPFMQQNKFRKAIVAILMPMILVVSFGNC-FGKFAIVKKVYEVNDGFNIGSGL----LAKFIKTLVMYFPFSILYFV------FDLILFNLIEFWSGNNPVGYN--KYVKAYEENGEKLLLSYSDFGKRLDIQFAK................................................................................................................................................................................................ | 149 |
7 | -1.830 | PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501] | ali follow.. | 9 | 11 | .................................................................................................................................................................................................NMLFHIDENAYQKLLRYLEAVKRSFAGTAGSDEIIADIEARIAELFYEKMEN-QVITQKEVDAVIAIMGQPEDY............................................................................................................................................................................................................................... | 85 |
8 | -1.660 | HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242; | ali follow.. | 13 | 2 | .......................................................................................................................................................................................PYRLLPNTDQARIRALKTAVVKGDMCDVYDLPVLGEARIFLSKFETAHQSRNSKKHQANVKTARLYISHFIQVLN-RMEIKESHKALYGLPVDNFSVPDLSSE---ASLAEWGQKIRKRTSQG-----GIPIYNPTIAKVKVHYDI------MEGYEKQKSLQSLTNRSLEQLASMRVQADRLIL-----------------IWNQVEAKFQDVSPNEKRLEKCRDYGLIIIIGPEKNRIRKICLSIHIPIFFWK-----SLQKITFRYG..................................... | 260 |
9 | -1.630 | HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; | ali follow.. | 10 | 1 | ....................................................................................................................................................LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAEN------------------------IKRIECANLLHTAEACIEWHAWYQNEENELHIREGSRYDGYFEKVAQRISEIMT------------EIRETILRLKYETPETEKIIGVEYYQAVIR-------DGVRDYSG................................................................................................................................. | 185 |
10 | -1.580 | HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; | ali follow.. | 7 | 11 | .........................................................................................................................................................................................................................................................LLERIRDIRASEK---RVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNKLEYAATGHTAPELIAKRADASKDNMGLTSFKGVKVRRGDVTVAKN---YMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDFLRFNGRTVKREVAEKLALEQYE............................................................................... | 173 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review. |