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Query: ACL93478.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRDYYEILGVTRTIDEAGLKSAFRKLAMEHHPDRNGGCENAAGRFKEINEAYSVLSDPQKRAAYDRFGHAGVNGPQGGPGGFGGQGFDASDIFNDVFGDVFGEMFGGGRRQSNAPQRGQDLRYDLEITLEQAYAGAEVEITVPAAMTCEVCEGSGAKPGTSPSVCGTCGGAGRVRATQGFFAVERGCPRCGGSGRLVLDPCSNCHGHGQVRRERILSVRIPAGVDDGARIRLAGEGDAGARGGPRGDLYIFLSVTPHELFERDGLDLLCTVPVPMTTAALGGEIDAPCLLGGESCDGECKVKVHVPEGAQTGKTVRLKGKGMPSLRSRQRGDLVVELFVETPTHLSARQKELMRELAGLCGEKQNPKSANFVGKAKRFWEEVTGSLast
1 -5.190HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  16  29...................................................................................................................................................CEKCDAYIATINDNQENCQGCRVDGIKTVFCDNMCGIRQCALEKG------ATCGDCLDLERCPTVGEILENNPSALKN............................................................................................................................................................... 124
2 -3.010PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  18  265MTETLARVYVEQKNFSKAKQ-AYRILSLKY-PEKSG-----ADQIRAIEKLQE............................................................................................................................................................................................................................................................................................................................................ 312
3 -2.790PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  8  48.......LSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTLTEKQYSDYLRL.............................................................................................................................................................................................................................................................................................................................. 107
4 -2.520HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  11  25..........DDVNVTLTPSEEVVNAFQQKYPDVKNVKWEILVGAYEAEGQHIVLDKVEAQAYITQGGK............................................................................................................................................................................................................................................................................................................................ 93
5 -2.340PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  11  4.....................................................................................................................................................................PVCSPWGR----FGCYLLLFACPKKEFIGRTAKSLSLAWSQEIVAGELERCFLAMPPIVTMEERNDLCRRAGHLSGFTHTASLFIRIQTSTVRILPFSDSSSVICVVTTVLHPVADSRIDFYTTEWKPLKTDRFWQQPRIDRQSYAYQAIYASLTPSYMQVSLSEESDTLSIRQTVTETLAEEEKPLAAIFLSPEPLVYRWQSGRFVRQV.......... 263
6 -2.280HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  13  20.....ELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKR............................................................................................................................................................................................................................................................................................................................... 80
7 -2.110HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  15  20..........................................................................................................GAASGALSDERGAGTVLVVGV------------AVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVAPGDPCEAASRVARANGAEVTTCSVTG---EDVVVEVSVEARV--GVSRPAVSSARAGPVDDP............................................................................................................................................. 142
8 -2.090PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671;  ali follow..  13  42...........TKITVKELPQVVKSTLSKDYEGTI---KEAFVAEKENGKVYKI-STEEITVLLNEKGE............................................................................................................................................................................................................................................................................................................................ 105
9 -1.990PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  18  131........AVSRVVTPDDLDNAGNVLFKLNDADKDE---------EKSLRAALTLHTIRETDLFEIF.............................................................................................................................................................................................................................................................................................................................. 180
10 -1.990PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  9  3.............................................................................................................................VLSLKEVKLLMNDTQKNDLFYVCCLIEFIGRKTKNRRSIIVQKLGKKELIR----QLDIAEANHCLSFEQVSDEIIEYFN-EGDFHTVESCKYNVPSVQAIGKVYHRLIISIISEQDNLVDVLFEVFNSFISDEISDFNSSVYYSNPEYLKYSYLEGRL..................................................................................................... 158
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;