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Query: ACL93480.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPRRLRPTRLEHVVDGHALRARLSAAALDSIGNEAEQRARAIDILKQALFRGRMIAKERLENGASGVETSRLLSGVTDEVITALYDFTTVHVFRARNPTEGERLCLLAVGGYGRGTLAPFSDIDLLFLRPYKQTPHAESVIEYMLYALWDLGFKVGHASRTIEECVRLSKEDFTIRTSILEARRLTGDERLAEDLKKRFRDEVMKATGAQFVAAKLKERDDRQARAGASRYMVEPNVKEGKGGLRDLHTLMWIAEYLHPVDRPEDVFKMEVFSIRETKAFIRAFDFLHAVRAHLHFTTGRPEERLTFDLQPEIARRMGYGDRGDAPAVERFMRRYFLIAKEVGTLTRAFSAKLEAEHFKNEPKGISRFLPGARPKRKALDVEGFYEDGGRLNIEGQEIFEADPVNLIRLFKIADERDLDLHPDAFTAVTRALPLITSRVRRDPDACRAFLDLLARGKRSYRTLTLMNDAGVLGRFIPEFGRVVAQMQFNMYHSYTVDEHTLRAVGVIGDIAAGRLVDDHPLAVSIMPLIEDREALFLAMLLHDTGKGGVGGQEKAGARSARSACERLGVERSKVELVAWLVENHLVMSDFAQKRDVSDPGTVAAFARIVENPERLRLLLVITVADIRAVGPGVWNGWKGQLLRELYNATEAVFRGGRGSDAAANVQRHQESTAEAARAALLETDPAAKGWVAAMENAYFSAFSQDDLFHHAELARRAAIQGGAAAEGQVRPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKVTDTRKLNALKADLLAALEQNEASAPAARPGLRRARASVARLast
1 -6.910PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  12  6...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HFITITHHKILVMQGCFRIG-----------------------LYKQGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWL-KHH-YWIDYAVSKPGDDKTHTKMEGMKMPIRYVCEMF-----IDRVSASKN--EKYTDKSALEYYEKSVDHYM------------IHPDTKAMLEYLLVMLSVKGEEYTYSYIKKEVLKGHIP............................................................................................................................................................................................................................................ 185
2 -5.130HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  10  1............................................LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIW-------------------EDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIHAWYQNEENELWQMDMIHIREGSGYFEKVAQRISEIMTDEIRETILRLKYETPETEKII---GVEYYQAVIRDGVRDYSGFKE--WRKQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 192
3 -3.410PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  8  2...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TVLSLKEVKLLMNDTQKNDLFYVCCLIEFIGRKTKNRRSIIVQKLGKKE---HCLSFEQVSDEIIEYFNIQEGDFHTVEYNVPSVQAIGKVYHRLIISIISEQDNLVDVL----------------------EVFNSFISDEISDVYYSNPEYLKY............................................................................................................................................................................................................................................................................................. 151
4 -3.060PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  8  16.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LLYM---IEDIIRVYGCS-----TRIRKEYIDKFDYTDEQKEEEE-----FGDLVRMMNQEGCRENGHLQINKVVMQALTELHTQLLASSKF--------------PFYSAEYYRVLPFIVELRGKTKQVADRMARKNEANLKEIAANLGHSEVETCFDVLYGVMMLRLQKKEISRETE.................................................................................................................................................................................................................................... 172
5 -2.900HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  15  7........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NIFHARTENKTDLDKIEDVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFED.......................................................................................................................................................................................................................................................................................................................................................................................................... 80
6 -2.750PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  10  1...........................................................................................................................................IKEELVRCIWFGQHIEKKNLRTDDEILSPGWWNNEEGPDFKHAEFFLEGKGLIR---------------------------------GS----VEIHVFAS-----------WIHHKHENQKTYDAVC--------------------------LHVVMWNDLKTLSLYLEAELDEIIETIDVGSYIGNKQVIPGYCNLEMRKQKITQQWIGGFLDYAGDERILQKAKKYEKWIENKPEAIMESLGYKNNKKPFL--MLASLVTAETIQSFVPEYTPAQEKKIIAQSLLLGMAGLLPLNEEETKRFDDETIQYFDRIFSTWQGIKPKIHQTPLTRESWSYTGIR-----------PANFPDRRIVAIANILSEHLDNGLFRYILRIFQKRDKSFVNEFLSPFLETHDAYWSYRYTPGGKKLNKPQKLLGKERTSNIFVNVII---VMLVYARKHNDKALEERLHYIYRNYTPHPSTKFMGTRIFGTSMVSNKVIHSARRQQGLYQLFKD.................................................................................................................................................................................................................................................................................................... 458
7 -2.370PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  14  118......................................................................................................................PEDKLDETFTSIPPSELEYGEDKPEDEEP--DKKQASGSSFEDIDMAVHTIWKESPSDEEMRHAGKVM-GTELFTRITERLTDEAMSERLAKAMAVFVDTVNMTVTQQKEKVFVIPDNIEE------DFR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 243
8 -2.330HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  10  2.......................................................................................................VGVFCVEGFS---------VDVFIVHIR--------CFPVLFFCHFSVSDTFANKAASGGNVVSENTIAVHEQTD-LPDAELAGMGGQLHSLTYSRIQRISTTEYIFSLKDWIDKLAQRAAVLATAYYRCQPVCEYYIFTLRRI..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 148
9 -2.070PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  18  118......................................................................................................................PEDKLDETFTSISPEELEYGEDEPEDDEP--GKGQASGSAFEDIDMAVRTIKKDSPSEAEMRHAGKVM-GTELYSRITERLTDEPMSERLAKAMAVFVDTVNTTVAQPKTKVFVVLDNIEE---EIRNN..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 245
10 -1.980PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  9  2..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RKLGFTLVAALNNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRN----AVYGNLKLMKNTLT--------EKQYSDYLR............................................................................................................................................................................................................................................................................................................. 106
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.