Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: ACL93483.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150
# Score Template Links and tools%idFirst MIVTLTDQPFEPGVLVSAFCAGREETGAVATFIGLARAEQGAARALELEAYPGFTDAAITEIAQGAVTRFALQDVHIVHRVGVIAPGEAIVFVATAAAHRREAFEACDYLMDYLKSRAPFWKKEHGPEGPRWIEPTARDRTDAQRWDQEALast
1 -5.230PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  15  6..........................GSFPPVGRSIAYRCGAFQLLAQMALEGVAPAQVRGALTAVIRRT-FDNDTGNDGAGWLRIGLAGHQPGLGEVYISTGLCTTAFLPLGLPASDDFWPDAPWTSARVW.................. 126
2 -4.220PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  11  41...........ANTCVELMRQLNPGVRDTEEHTTKLWDHLFIMSNFKLDVDTPYPMPDIAVLGRKPERPYNHNKLKYKH-YGK----NLLIEQAILKEDGAEKEDAIIYLGRLMKRLYSTWNKENVDDEVIV.................. 159
3 -3.560HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  7  115..............................AYTQIAKYN----TFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFYYTDVPM-KTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRG...................... 209
4 -3.370HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;  ali follow..  14  45.............................................LSYTTFTGQPEISVNIDSETGAPQAYATFNVKVTNTGKVP-GKTSVQIYGQAPYTEGGLE------KVAIQLLNFEKSSELAPGASEIVSVKVDLQYIASYDME. 145
5 -3.250PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  11  1.............................................MLFQIYGENAGWQLLGW--------------LLVFAGLILANELA--------RRTKVGGIFCFLIVPA-ALTVYFIAIYAANGAEWALNNPT............ 72
6 -3.130PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  11  6.........................IGGLLMAVGTG------FIIQDVACI--MLIGAICFATMQMRQQYLGTNLTI-RRLRKIMVLADIGFILAGL------EDSYGFVKQYLANSIGGYTTYVNIFYHNWV................. 106
7 -2.580HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  13  27..............................SFSGNEDG-------MRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLDKTDPALRRREIFPMTEEGRAVAQYLNDAYNAEPERWSAHPS-DCEPWTPPAPEPDAETQH..... 136
8 -2.550PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  8  352..............................................TIDNYAFIVPKQASDLLTEGKA--------LSHCVGQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKD-NKWAKLLKSKTKVLQN..... 452
9 -2.470HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  10  17...........................................KQNQEKAWQVIKNTNIIQIWEDAGAK--------INLVGSLRTGDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEENELWQ... 118
10 -2.450HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  10  16....................................KTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLE-DKDKVYIKILTYEFEDEYVSFRIFSQ--------WKVKLVTE...................... 100
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.