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current user: public |
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Query: ACL93483.1, from C.crescentus |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 | |||||||
# | Score | Template | Links and tools | %id | First | MIVTLTDQPFEPGVLVSAFCAGREETGAVATFIGLARAEQGAARALELEAYPGFTDAAITEIAQGAVTRFALQDVHIVHRVGVIAPGEAIVFVATAAAHRREAFEACDYLMDYLKSRAPFWKKEHGPEGPRWIEPTARDRTDAQRWDQEA | Last |
1 | -5.230 | PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] | ali follow.. | 15 | 6 | ..........................GSFPPVGRSIAYRCGAFQLLAQMALEGVAPAQVRGALTAVIRRT-FDNDTGNDGAGWLRIGLAGHQPGLGEVYISTGLCTTAFLPLGLPASDDFWPDAPWTSARVW.................. | 126 |
2 | -4.220 | PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147; | ali follow.. | 11 | 41 | ...........ANTCVELMRQLNPGVRDTEEHTTKLWDHLFIMSNFKLDVDTPYPMPDIAVLGRKPERPYNHNKLKYKH-YGK----NLLIEQAILKEDGAEKEDAIIYLGRLMKRLYSTWNKENVDDEVIV.................. | 159 |
3 | -3.560 | HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; | ali follow.. | 7 | 115 | ..............................AYTQIAKYN----TFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFYYTDVPM-KTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRG...................... | 209 |
4 | -3.370 | HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; | ali follow.. | 14 | 45 | .............................................LSYTTFTGQPEISVNIDSETGAPQAYATFNVKVTNTGKVP-GKTSVQIYGQAPYTEGGLE------KVAIQLLNFEKSSELAPGASEIVSVKVDLQYIASYDME. | 145 |
5 | -3.250 | PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704] | ali follow.. | 11 | 1 | .............................................MLFQIYGENAGWQLLGW--------------LLVFAGLILANELA--------RRTKVGGIFCFLIVPA-ALTVYFIAIYAANGAEWALNNPT............ | 72 |
6 | -3.130 | PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF | ali follow.. | 11 | 6 | .........................IGGLLMAVGTG------FIIQDVACI--MLIGAICFATMQMRQQYLGTNLTI-RRLRKIMVLADIGFILAGL------EDSYGFVKQYLANSIGGYTTYVNIFYHNWV................. | 106 |
7 | -2.580 | HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310; | ali follow.. | 13 | 27 | ..............................SFSGNEDG-------MRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLDKTDPALRRREIFPMTEEGRAVAQYLNDAYNAEPERWSAHPS-DCEPWTPPAPEPDAETQH..... | 136 |
8 | -2.550 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali follow.. | 8 | 352 | ..............................................TIDNYAFIVPKQASDLLTEGKA--------LSHCVGQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKD-NKWAKLLKSKTKVLQN..... | 452 |
9 | -2.470 | HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; | ali follow.. | 10 | 17 | ...........................................KQNQEKAWQVIKNTNIIQIWEDAGAK--------INLVGSLRTGDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEENELWQ... | 118 |
10 | -2.450 | HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167; | ali follow.. | 10 | 16 | ....................................KTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLE-DKDKVYIKILTYEFEDEYVSFRIFSQ--------WKVKLVTE...................... | 100 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703. |