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Query: ACL93485.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTPYDDSPAQAVSTAPRTTGPSLIDGFGRAVTYLRVSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVGLGVRKLRLTGGEPLVRKGFIGLVARLSRHLSSGALDELTLTTNGSQLERYASDLARHGVRRINVSLDTLKPALFRALTRGGDVTRVIAGIDAAQAAGMTVKINAVALKHDNAGEIPALIQWAHGRGCDITLIETMPLGEVDQDRTDQFLSLQDVRRDLSSFWTLTDIPDSTGGPARYVHVAETGGRLGLITPLSNHFCDTCNRVRLTCTGTLHTCLGRDDASDLRAEIRRGASDAELVDAIHLAIGAKPKGHDFQIAAAQPAVARHMSTTGGLast
1 -2.880PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  11  111.................PVQIKLAPVNAPYFDGAKLLIAADC---TAYAYASFHEKFIKGHVTSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFPWQVATISIDGRIL................................................................................................................................................................................................................................. 223
2 -2.690HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  11  69.........................KHQANVKTARLYISHKESHKALYGLPVDNFSVP--DLSSEASLAEWGQKIIE-GERKRTSQGGIPIYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQ---------LASMRVQADRLILDIWNQVEAKQDVSPNEKRLEKCRDYGL------IIIIGPEKNRIRRFFKICLSIHIPIFFWKSLQ........................................................................................................................................ 253
3 -2.570HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  15  20....................................KMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHINCQG...................................................................................................................................................................................................................................................................... 70
4 -2.180PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali follow..  10  33...................ETDASTQYNDLFSYAIKRL-ERCHFGCKHCPIHCYQPARREAIKAI-----------------MRWSGPRMLLRHPILAIRHLIDDHRPVPDYPKRETSAKTSTGRTARLATQRATSADSDAD............................................................................................................................................................................................................... 142
5 -2.160PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  182........................................................................................EFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAID-------SENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQAS--------DLLTEGKLSHCVGGSNYIK---FVRDKQDLEKSLYTLEQIYQLRGKHNCDPTKDVQMAANKWAKLL.. 443
6 -2.120PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  10  1......................MSETKERLCIYADFPYEAVCRTDCPKCLRASAYDGVLARGLQKITVINPLIPTSEQGCTPVLFAHGVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRD-----FVRAGFSSDLIRYDAMVYM........................................................................................................................................................................................................ 147
7 -2.120PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;  ali follow..  12  10...............................................IPSFISYGNLQTATMIIGTPLSIAESYVHKNMGEILQQTMSITQIRIKPTD--------------NKLFLNINHINVSDWFKEQLNKLNQSVRMKQRQKIVRVQS------------SNDSILLDFSKKVKFNAAL...................................................................................................................................................................... 120
8 -1.970PB078508 A6TV41_9CLOT/1-155 PB078508; Pfam-B_78508;  ali follow..  10  2...................................................ETIKFNSEAHELFYKEMLARTNQTDVYYKAFFYCMGICETTRKHIEDLFDFKEGGIMPEHLHQPYQTGTSYKVTRMAYNLVEEGTESLTTPSSLFACEYAAEFHQAIKIRF-----EYYRERDFEKSSLRKQIKDLTEKNVIESTNAKEHSEIE................................................................................................................................................ 155
9 -1.920PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  11  33...................................................................................TIWGGKRVGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIF----KGEYNVRIDGPFIPLVRENTDGTLLHDGSVNTEISGTTKVKFEVQVEFVGNPQVSNGVIKAQVRVTR..................................................................................................................................................... 160
10 -1.910PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  14  104.................................................................NQLKDILETIIGVEDVSIVVNTSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEI------IIKNGDKETPVVVQTKKPD----VAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKMKE.............................................................................................................................................................. 229

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 5 6 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.