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Query: ACL93486.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTQRDTGRLDAIVLAAGRGVRFGGGKLTALLDGDPLVAAALLTAFLAPARRVVVAVGPEPDVRQAVEATATRLLARERLVLVPIDDPSAGMGASLAAAARSLPGDTDGVFVFLGDMPRIDPATPRHLAAALRDPGDIVAPTYLGRRGHPVLFGARWAPVLGALSGDEGARAIVDKAGESLVLVPVDDPGVHLDVDRPSDLARVQTDRRTLLast
1 -3.040PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  18  1.............................................................................................................MTLLGDTPVPGPGGMAVTYEQVATGGLPVAGLERPVV--PRLSAGLKLHGEYQGSGFTEPKYIARRGDGQVVQLSRLLHLVASSVDGSRDIETIAHRVSG. 107
2 -2.750HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  12  23..............AWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEENELWQM---DMIHIREGSRYD-------------------------YFEKVAQRISEIMTDEIRETILRPETEKIIGVEYYQAVIRDGVRDYSGFKEWRKQHPV. 195
3 -2.680PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  13  1........LEKIISISGRP---GLFEVHTQTRTGVVATSLVDRNQVSLLSEINIYGLEKEVPLQEVLTMIHTKEEGKQCSVKPKSP-----ADELEAYFFDVFQDYDEERVYPSDIKKI........................................................................................... 111
4 -2.580PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  20  2...........................................................................................TQTSASVLNLINPEDIESQTILKD------AAATALYGSRGANGVVLITTKSGRRGKTHI........................................................... 55
5 -2.570PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  206.......SIFALTITFAYNSTFLNLAQIVRIN-RPNPNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVK-AVNYLKSEENNWYLTGRDFPLLG------VEKFFKDDVEVFSPKI------PALY---VNNSTKNIFSSVGISSLSTNNPKLIFTFTFDN....................... 378
6 -2.550PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  4.EDSRHSKYVIRIICEGEKT---EPLFFTSLCDKLLDENGGEEEWDVKTIPQPDIPEEKPSMADRGLYKNKKKRVKGKKDKLQPEVQGQPPLSWIRLSRKKLNEGVDEAWAVF-DEHPARKDAFEEAEKLIDDKKVNIA-------SSRS-FEYYLLLHFEYLYHPFHATECGERIDGKK.............................. 173
7 -2.350PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;  ali follow..  15  20LAARLFPAMFALLMLRPFGDRLVGWDTYRRLDLLPYLSADTQSLQLSSFDR----SGGDFDISTGNKNGTGGCLAPGGAGCVIAEDHGAGEVDSIWLTRDGGNLRAIGNIRVELDQTVLDTPVQSLVDGQLGAPFVWPLVANAGESPGPMPYRRSM-------------------------RISVESHLEYYHVD............... 209
8 -2.140HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  10  84....ESNGIYMQVINDGCGDYIKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTS-----GTFEGYFVDIKKSLLANTYNSSYYGTVSATVPSGWLIPF-----WIKVGRLITADDELAHVRLLVPHTYGASVYACLYDIRF...................................................... 234
9 -2.140PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  13  23.......NLLLVLLLIIYNTTTSNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNGMII................................................................................................... 126
10 -2.040PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  13  63............IEAMGKKATFGNNITLTPDECRTLKDYAVSS----------FAEKAEKLKYKQKYEQAEKSASVWKRRF-----------EALNEKYLELKKKAQPYLDALEIASEKVRAFLDAVLARGKETRELKIPARKRGQD............................................................... 176

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.