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Query: ACL93487.1, from C.crescentus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst MKAGPDAEADALGDEEDIAMFVQALAGVNMDYRRVLSLLIPRLAALEERGDTAGAVRLIQEIQAIINAPERPEHLast
1 -4.430HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  11  2..................................FVWIIVPMARTATEKLEMRGQSVTVENIGKTVTDG..... 36
2 -3.170HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  26  18..................................AITCLMATTAFAAGTGDVAGAVEASTQIKSVVDN...... 56
3 -3.090PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  23  102.............QKYIEEQFAAELKKLTRTEGQILVKLIHR-----QTGVT--TFQLIKNLR........... 144
4 -2.850PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  14  15.............................KEYGKNIQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVR... 56
5 -2.660PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  9  215.........ALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMFDDVSTVDKCRKFLQKE............ 269
6 -2.580PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  15  29...................RLKGYLDGLPPETCRRIVLGMLAAFAAYDIGRNDGSRMETGHAGRV......... 84
7 -2.480PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  5  65......MNQEGCRENGHLQINKVVMQALTELHTQLLASVLPFIVELRGKTKQVADRMARKNEANLK........ 136
8 -2.430PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  7  1...........MHNFKEKIQFSKIRSRSCPKFRKAIVAILMPMILVVSFGNCFGKFAIVKKV............ 56
9 -2.400HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;  ali follow..  21  2..................................VVSILFQKARKVNERGEANYFSTVVFIFIAVL........ 35
10 -2.040HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  24  29.............DEDDMAKSTKTYEE--------------RIRALEEQESIEATKKLIAQRKELEKRKK.... 73
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.