|
|
|
current user: public |
|
| Query: ACL93487.1, from C.crescentus |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 | |||||||
| # | Score | Template | Links and tools | %id | First | MKAGPDAEADALGDEEDIAMFVQALAGVNMDYRRVLSLLIPRLAALEERGDTAGAVRLIQEIQAIINAPERPEH | Last |
| 1 | -4.430 | HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255; | ali follow.. | 11 | 2 | ..................................FVWIIVPMARTATEKLEMRGQSVTVENIGKTVTDG..... | 36 |
| 2 | -3.170 | HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; | ali follow.. | 26 | 18 | ..................................AITCLMATTAFAAGTGDVAGAVEASTQIKSVVDN...... | 56 |
| 3 | -3.090 | PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733; | ali follow.. | 23 | 102 | .............QKYIEEQFAAELKKLTRTEGQILVKLIHR-----QTGVT--TFQLIKNLR........... | 144 |
| 4 | -2.850 | PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147; | ali follow.. | 14 | 15 | .............................KEYGKNIQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVR... | 56 |
| 5 | -2.660 | PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795; | ali follow.. | 9 | 215 | .........ALYIDFWMLGDAARELPDNSWQKHRARELGNLVMNMFDDVSTVDKCRKFLQKE............ | 269 |
| 6 | -2.580 | PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605; | ali follow.. | 15 | 29 | ...................RLKGYLDGLPPETCRRIVLGMLAAFAAYDIGRNDGSRMETGHAGRV......... | 84 |
| 7 | -2.480 | PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF | ali follow.. | 5 | 65 | ......MNQEGCRENGHLQINKVVMQALTELHTQLLASVLPFIVELRGKTKQVADRMARKNEANLK........ | 136 |
| 8 | -2.430 | PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104; | ali follow.. | 7 | 1 | ...........MHNFKEKIQFSKIRSRSCPKFRKAIVAILMPMILVVSFGNCFGKFAIVKKV............ | 56 |
| 9 | -2.400 | HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658; | ali follow.. | 21 | 2 | ..................................VVSILFQKARKVNERGEANYFSTVVFIFIAVL........ | 35 |
| 10 | -2.040 | HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; | ali follow.. | 24 | 29 | .............DEDDMAKSTKTYEE--------------RIRALEEQESIEATKKLIAQRKELEKRKK.... | 73 |
FFAS is supported by the NIH grant R01-GM087218-01
|
|
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26; |