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Query: ACL93468.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYALVRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDRIEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPDRLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLGLast
1 -5.360sp|Q9Y6X0|SETBP_HUMAN SET-binding protein OS=Homo sapiens GN=SETBP1 PE=1 SV=3  ali   18  4...................................................................................................................................................LQGFSYPIPSGSYYAPYGMPYTSMPMMNLGYYGQYPAPLYL-SHTLGAASPFMRPTVPPP.............................................................................................. 62
2 -5.150tr|E5RIT2|E5RIT2_HUMAN Uncharacterized protein OS=Homo sapiens GN=ELP3 PE=4 SV=1  ali   9..................................................................LSPAELMMLTIGDVIKQLIEAHEQGKDIDLNKVKTKTAAKYGLSAQPRLVDIIAAVPP---QYRKVLMPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGTFMALPEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGITIETR........................................................................... 166
3 -4.940sp|A6NDU8|CE051_HUMAN UPF0600 protein C5orf51 OS=Homo sapiens GN=C5orf51 PE=1 SV=1  ali   12  1....................................SNPSNLLELYTQAILTYFEENKLVDEDFPEDSSSQKVKELISFLSEPEILVKENNMHPKHCNLLGDELLEC-----ALLYMYCHSLTKRREWLLRKSSLLKKYLLDSYLLQMLNYRCPIQLNEGVSFQDLDTAKLLSAGIFSDIHLLAMMYSGEMCY............................................................................................................ 162
4 -4.890tr|B7ZMK1|B7ZMK1_HUMAN C9orf11 protein OS=Homo sapiens GN=C9orf11 PE=2 SV=1  ali   20  1..............................................................................................................................................NYYKDIKQYVFTTQNPNG------TESEISV-------RATTDLNFALKNGSTPNVP...................................................................................................... 44
5 -4.730sp|Q9Y6R0|NUMBL_HUMAN Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV=1  ali   22  16...........................................................................................................................................................................APVGPFDAAPAQVAVFLPPPHMQPPFVPAYPGLGYPPM----PRVPVVGIT--PSQMVA....................................................................... 68
6 -4.640sp|Q99683|M3K5_HUMAN Mitogen-activated protein kinase kinase kinase 5 OS=Homo sapiens GN=MAP3K5 PE=1 SV=1  ali   18  33..................................................................................................................................................TLETLHFKLDFGETTVLDRFYNADIAVVEMSDAFRQPS..................................................................................................................... 71
7 -4.570sp|Q6NXP2|F71F2_HUMAN Protein FAM71F2 OS=Homo sapiens GN=FAM71F2 PE=2 SV=3  ali   2......................................................................................................................NGLLCQLIHSPEFNLFSNSVVFESNFIQTHVPEADFQVTKPGNWRDVCEGSATVILGVTSSVPSPNVLLMAN............................................................................................................... 76
8 -4.390sp|Q8NDB2|BANK1_HUMAN B-cell scaffold protein with ankyrin repeats OS=Homo sapiens GN=BANK1 PE=1 SV=3  ali   14  1.........................................................................................................................................................................DIIMIYEEDAEE---ALYLTEKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLLRDLTPKKCQFLEHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEP-EDYISVIQSIIFKDSEDYFEVN 138
9 -4.290sp|Q8IYT1|FA71A_HUMAN Protein FAM71A OS=Homo sapiens GN=FAM71A PE=2 SV=2  ali   23  49.......................................................................................................................................................DFIQITKRGEVIDVHNRVRMVTMGIARTSPIPDVMLLAR............................................................................................................... 90
10 -4.140sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1  ali   11  30....................................................................NLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSG--FDKAELCMKNLMESLDSLLCAEGSESLKSLKLLLCLVTVTDNISQNTILEYVMINSIFEAILQILSHPPSRREH-GYDAVVLLAL------LVNYRKYESVNPYIVKLSIVDDEATLNGMGLVIAQALSEYNRQYKDKEEEHQSGFFSALTNMVGS......... 255

FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 0 4 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.