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Query: ACL93469.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSLTPVTLASQSSARQMILKNAGVAFEAVSPGVDEDAAKAGLLAEDVTPRDIADALAEMKAVKVSTKRPGLVIGADQTLDLKGRLIDKAGSLDEARARLLELRGTTHKLHSAVVVARDGRPIWRIVESAKLSVRPFSDAWLDRYIERRGEALLWSVGCYELESEGVQLFDKIEGDYFTILGLPLVGLLDFLRLHGALTVLast
1 -6.020sp|O95751|LDOC1_HUMAN Protein LDOC1 OS=Homo sapiens GN=LDOC1 PE=1 SV=1  ali   13  6.......FNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLIS------LLTGEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEEEDD................................................................................................. 94
2 -5.700sp|Q17RM4|CC142_HUMAN Coiled-coil domain-containing protein 142 OS=Homo sapiens GN=CCDC142 PE=2 SV=1  ali   13  46MQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLTGERGCQVASRLDEALQGSA........................................................................................................................... 121
3 -5.560sp|Q8N3F0|CG041_HUMAN UPF0452 protein C7orf41 OS=Homo sapiens GN=C7orf41 PE=2 SV=2  ali   13  20....ELIATEETERRMDFYADPGVSFYVLCPDNGCGDN--------SESEDCLPFLQLAQDYISSCGKKTLHEVLEKVFKSFRPLLGLPDADDDAFEE..................................................................................................... 109
4 -5.400sp|Q8N8U3|ZCHC5_HUMAN Zinc finger CCHC domain-containing protein 5 OS=Homo sapiens GN=ZCCHC5 PE=2 SV=1  ali   10  7.......FSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGN------CFSGRAGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENMKDANQCIHQL................................................................................................. 95
5 -5.230sp|Q8TC36|SUN5_HUMAN SUN domain-containing protein 5 OS=Homo sapiens GN=SUN5 PE=2 SV=1  ali   126..............................................................................................................................MEAMSDEQKMAQKIMKMIHG-------DYIE-FALKSIGASIDFEHTSVTYNWNWIQL............... 185
6 -4.990sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3  ali   24  4..............................................................................................................................GVTEEQVHHIVKQALQRYSE-------DRIG-YALESGGASVISTRCSETYSLFGIPL............... 63
7 -4.850sp|Q8N3R3|CC023_HUMAN Uncharacterized protein C3orf23 OS=Homo sapiens GN=C3orf23 PE=2 SV=2  ali   10  1................ELSHQLQLSDIRWQRSWGIAHRCSQLHSLSRLAQQNLETLKKAKGCTIISAVGHVMLGTMDVHHHWTKLFERLPSYFDLQRRLMILEDQISYLLGGIQVVYIEELQPVLTLEEYYSLLDVFYNRLLKSRILFHPRSLRGL-QMILNSDRYAPSLHELGHFNIPTLCDPANLQWFI........ 181
8 -4.820tr|B5MDG3|B5MDG3_HUMAN Uncharacterized protein OS=Homo sapiens GN=C14orf80 PE=4 SV=1  ali   10  32........EDGSQGSRELL--LALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELV---FWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLV........................... 190
9 -4.730sp|O60241|BAI2_HUMAN Brain-specific angiogenesis inhibitor 2 OS=Homo sapiens GN=BAI2 PE=2 SV=2  ali   10  1.......FDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCAHFAPRLLPLDHYL--VNFTCLRPSPEEAVAQAESEV................................................................................................. 93
10 -4.570sp|Q8WYQ5|DGCR8_HUMAN Microprocessor complex subunit DGCR8 OS=Homo sapiens GN=DGCR8 PE=1 SV=1  ali   14  13...............ASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLYTGA---ERDVRAECGLLLSPVSGDVH............................................................................................ 101

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.