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Query: ACL93474.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst MKVRPMANNPGAKKAIRKIARRTEVNTARRSRVRTFLRKFEDAIAKGDVAVAKAAFVEAQSELMRAVSKGVVHPNTGSRKVSRLAARLKKLDKAAALast
1 -6.230sp|Q5TAH2|S9A11_HUMAN Sodium/hydrogen exchanger 11 OS=Homo sapiens GN=SLC9A11 PE=2 SV=1  ali   13  26...KQIAVCESIYQKLCEILETNKQDVKELVLMEHEGRDVVIALKT--KQAIRNVIAKALKNLTFLCSRGIIDKHEVIEINKVLLKKLKALNN... 114
2 -6.130sp|Q96SY0|CO044_HUMAN UPF0464 protein C15orf44 OS=Homo sapiens GN=C15orf44 PE=1 SV=2  ali   6  1............LRHSLATQNQRSESNRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQSMFGKLIDL.. 82
3 -6.030tr|Q5T191|Q5T191_HUMAN FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) OS=Homo sapiens GN=FLAD1 PE=2 SV=1  ali   7  60LDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGNYLMFQTPSRSCISAASPLSLSWNSFYRTLSR................. 138
4 -5.890sp|Q86VI3|IQGA3_HUMAN Ras GTPase-activating-like protein IQGAP3 OS=Homo sapiens GN=IQGAP3 PE=1 SV=2  ali   13  8....................QAEIQGNINHVNVHGALEVVDDALERQSPEALLKALQDPALALRG------VRRDFADWYLEQLN........... 66
5 -5.880sp|Q6ZVZ8|ASB18_HUMAN Ankyrin repeat and SOCS box protein 18 OS=Homo sapiens GN=ASB18 PE=2 SV=2  ali   5  15..................................DLVKRLKSALDAKDEERVRDLICTEITPVDAVIE............................ 48
6 -5.710tr|C9JFL4|C9JFL4_HUMAN Uncharacterized protein OS=Homo sapiens GN=ASB18 PE=4 SV=1  ali   5  15..................................DLVKRLKSALDAKDEERVRDLICTEITPVDAVIE............................ 48
7 -5.420tr|E9PL38|E9PL38_HUMAN Uncharacterized protein OS=Homo sapiens GN=PSMD13 PE=4 SV=1  ali   17  47...RQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK--LNIGDLQVTKETIEDVEEMLNNLPGVTSVHSR..................... 116
8 -5.200sp|Q2PPJ7|RGPA2_HUMAN Ral GTPase-activating protein subunit alpha-2 OS=Homo sapiens GN=RALGAPA2 PE=1 SV=2  ali   14  1.............................KKDVLTRLKHLRALLDNVDANDLKQFFETNYSQIYFIFYENFIALENSLKLKGNNKSQREELDS... 64
9 -5.180sp|P46940|IQGA1_HUMAN Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens GN=IQGAP1 PE=1 SV=1  ali   12  11......................EIQGNINKVNTFSALANIDLALEQGDALALFRALQSPALGLRG------LQQQNSDWYLKQL............ 66
10 -5.130sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2  ali   9  11VNLHAVSLTQDVFEDERKVLESKLTAHEAVTVVREVLQELLMGVLTPERTPSPVDAYLTEEDLFRHRNPPLHYEHQVVQSLHQLWR.......... 96
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.